Pairwise Alignments

Query, 407 a.a., Two-component system sensor histidine kinase/response regulator hybrid from Variovorax sp. SCN45

Subject, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

 Score =  121 bits (303), Expect = 1e-31
 Identities = 99/321 (30%), Positives = 163/321 (50%), Gaps = 34/321 (10%)

Query: 93  LNYAFQGYESGAVDFLHKPLDPHAVTSKVNVFVDLHRHRKALRHEMDQLAVAHHKQEELV 152
           L+   +G   G +D L K ++  AV+        L  +   ++H +DQ   A     E +
Sbjct: 219 LDVRIEGKMHGELDTLKKGINAMAVS--------LSEYHVEMQHSIDQ---ATSDLRETL 267

Query: 153 QQLQHTQRELE-------RAVRMRDDFMSMVSHELRTPLNTLYLEAQLRQLHLSKGNLAN 205
           +QL+    EL+        A R++ +F++ +SHELRTPLN +      RQ+   K  L N
Sbjct: 268 EQLEIQNVELDIAKKRAQEAARVKSEFLANMSHELRTPLNGVI--GFTRQM--LKTQLTN 323

Query: 206 FTPERLPSMIERDQRQIRNMVRLIDDMLDVTRMRRDALSIQTKPVDLSALSRAVVENLRQ 265
              + L ++    ++   N++ +I+D+LD +++    L+++  P +   +   VV     
Sbjct: 324 SQADYLQTI----EKSANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQAT 379

Query: 266 QAEAAGSPITLQTPAEL-RGV-WDEFRIEQVLTNLLTNALRYGSGKPVEMTV---SLEGD 320
            A   G  ITL+   ++ RGV  D  RI+QVLTNL+ N++++     ++++V   +L  D
Sbjct: 380 SAHEKGLEITLKIDPKIPRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDD 439

Query: 321 TA--RVAVRDQGIGIAPEDHARIFEQFERTDDS-RRHAAGLGLGLYITRKIVSLHAGHIG 377
               +  VRD GIGI+    A++F+ F + D S  R   G GLGL IT+K+VS   G I 
Sbjct: 440 VIDLQFMVRDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEIS 499

Query: 378 VESAPGEGSRFVVDLPLHIPE 398
           + S   +GS F   L LH  E
Sbjct: 500 LTSRLHQGSTFWFTLRLHTTE 520



 Score = 49.7 bits (117), Expect = 4e-10
 Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 11/112 (9%)

Query: 9   LLIVDDLPENLLALEALIRAPGRVVHRAASAEAALALLLEHEFALAIVDVQMPGMNGFEL 68
           ++ VDD P NL  + AL++     V    S + A+      +F + ++D+QMP M+G   
Sbjct: 667 VMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILMDIQMPHMDGVTA 726

Query: 69  AELMRGTERTRHIPIIFVSAAGRELNYAFQG-----YESGAVDFLHKPLDPH 115
            + ++  +  R  P+I V+A      +A  G      ++G  D+L KP++ H
Sbjct: 727 CKAIKQLKGYRDTPVIAVTA------HAMAGERDRLLKAGMDDYLTKPIEEH 772