Pairwise Alignments

Query, 407 a.a., Two-component system sensor histidine kinase/response regulator hybrid from Variovorax sp. SCN45

Subject, 1129 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  116 bits (290), Expect = 4e-30
 Identities = 88/274 (32%), Positives = 141/274 (51%), Gaps = 11/274 (4%)

Query: 125 VDLHRHRKALRHEMDQLAVAHHKQEELVQQLQHTQRELERAVRMRDDFMSMVSHELRTPL 184
           V   R ++++R ++  +   + + E  +  ++    EL+ A +++D+F++  SHELRTPL
Sbjct: 416 VSFERMQRSIREKISLIKSQNKELESNLLIIRKQNDELQLANKLKDEFLATTSHELRTPL 475

Query: 185 NTLYLEAQLRQLHLSKGNLANFTPERLPSMIERDQRQIRNMVRLIDDMLDVTRMRRDALS 244
           + +   A+   +  + G ++     +L  +I   QR    +  L+DD+LD  +MR  AL 
Sbjct: 476 HGMIGIAEAL-ISGANGPISAAHKYQLDIIISSGQR----LATLVDDLLDYHKMRYGALD 530

Query: 245 IQTKPVDLSALSRAVVENLRQQAEAAGSPITLQTPAELRGVW---DEFRIEQVLTNLLTN 301
           IQ   VDLS+ +R V+E            I  Q   +   VW   D  R+EQVL NL+ N
Sbjct: 531 IQRCAVDLSSATRLVLELSHHLLGKKTLRIINQVSEQ--PVWVSADPQRLEQVLYNLIGN 588

Query: 302 ALRYGSGKPVEMTVSLEGDTARVAVRDQGIGIAPEDHARIFEQ-FERTDDSRRHAAGLGL 360
           A++Y S   + ++ +   D  RV V D G GI  E    IFE   +   D+ R+  G GL
Sbjct: 589 AIKYTSEGKIVISATYIDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGHDASRYRQGAGL 648

Query: 361 GLYITRKIVSLHAGHIGVESAPGEGSRFVVDLPL 394
           GL I+R+++ L  G + V S P  G+ F   LPL
Sbjct: 649 GLSISRQLIELMHGTLYVSSQPMVGTTFSFTLPL 682



 Score = 72.8 bits (177), Expect = 5e-17
 Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 11/158 (6%)

Query: 9   LLIVDDLPENLLALEALIRAPGRVVHRAASAEAALALLLEHEFALAIVDVQMPGMNGFEL 68
           LL+ DD P NL  L++ +R  G  VH A      L  +   +  L ++D+ MPGM+G+++
Sbjct: 724 LLVADDEPVNLRVLDSFLRLEGYRVHTAQDGHQVLEAIKREKPELVLLDIMMPGMSGYQV 783

Query: 69  AELMRGTERTRHIPIIFVSAAGRELNYAFQGYESGAVDFLHKPLD---------PHAVTS 119
            E +R T     +PII ++A  +  +   +G+E+GA D+L KP +          H   S
Sbjct: 784 CEKLRQTYDHAELPIIMLTALNQS-DDRVRGFEAGANDYLSKPFNKQELAARIVAHLTAS 842

Query: 120 KVNV-FVDLHRHRKALRHEMDQLAVAHHKQEELVQQLQ 156
           K  +  ++  + +K L+H     A     Q  L++QL+
Sbjct: 843 KAELRRIENAQLQKELKHRAMVEASLLETQGRLLEQLE 880