Pairwise Alignments

Query, 290 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 295 a.a., Branched-chain amino acid ABC-type transport system, permease components from Pseudomonas stutzeri RCH2

 Score =  156 bits (394), Expect = 6e-43
 Identities = 92/288 (31%), Positives = 156/288 (54%), Gaps = 2/288 (0%)

Query: 4   INILLPSVLNGLTTGAVYALIAVGLTLIYGVLHIINFAHGASLMLALYAVYFLKERWGID 63
           +++LL  +L GL  GA YAL+++GL +I+G+L IINFAHGA  ML  +  +      G+ 
Sbjct: 9   LSVLLGQLLLGLINGAFYALLSLGLAIIFGLLRIINFAHGAQYMLGAFVAFLGLNYLGVS 68

Query: 64  PYMALPIAIVGMFALGYALQRIVINRAGHGKDENILLATLGIAIVMENLALLLFKSDTRS 123
            + AL +A + +  LG A++R ++ R         LL T G+A+++E   + LF     S
Sbjct: 69  YWFALVLAPLVVGCLGMAIERGLLRRIAGEDHLYGLLLTFGLALIVEGSFVKLFGVSGSS 128

Query: 124 IDTAYSL-STVAIGPAMIAVPKLVAFAGALVVSGVLFWIMGRTDLGRAIRAVAKEKEGAK 182
                 L     +G   +   +      ALVV    ++++ RT LG  +RA  +  +  +
Sbjct: 129 YPMPELLRGGFNLGFMFLPTYRAWVIVAALVVCLATWYVIERTRLGSYLRAGTENPKLMQ 188

Query: 183 LMGIDVDHVYAMSFGIGLACLGAAACFLLPAYYVNPQVGGGFVLVAFTIVVLGGMGSFVG 242
             GI+V  +  +++G G+A    A     P Y V P +G   ++V F +VV+GGMGS +G
Sbjct: 189 GFGINVPLLVTLTYGYGVALAAFAGVLAAPIYAVTPGMGSNLLIVVFAVVVIGGMGSILG 248

Query: 243 ALIGGFLVGVVESLGGLYLGESLGQIGIFAIFIGVVLFRPQGMFGAKA 290
           A++ G  +G++E L  ++  E+   + +F + + V+L RP G+FG +A
Sbjct: 249 AIVTGIAMGLIEGLTKVFYPEAANTV-VFLVMVAVLLIRPAGLFGKEA 295