Pairwise Alignments

Query, 424 a.a., 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) from Variovorax sp. SCN45

Subject, 868 a.a., Fe/S-dependent 2-methylisocitrate dehydratase AcnD from Vibrio cholerae E7946 ATCC 55056

 Score = 96.7 bits (239), Expect = 3e-24
 Identities = 92/343 (26%), Positives = 139/343 (40%), Gaps = 50/343 (14%)

Query: 122 CVGGDSHSPTGGAFGAYMFGVGSTEMLGVLVTGQIWLRVPETLQMWWDGKLSAGVTAKDM 181
           CVG DSH+P   A G    GVG  E   V++     +R+P+ + +   G    G+TA D+
Sbjct: 200 CVGTDSHTPHVDALGVLAIGVGGLEAETVMLGRPSMMRLPDIVGVKLTGARQPGITATDI 259

Query: 182 MLHMIGRFGMNGGRYQAVEFAGPAVMALSMQERMTLSNMSAELGAQAGLIAPDATTAAFL 241
           +L +             +EF G    AL++ +R T+SNM+ E GA AG+   D  T  +L
Sbjct: 260 VLALTEFLRRERVVSAYLEFFGEGAKALTIGDRATISNMTPEYGATAGMFYIDEQTIQYL 319

Query: 242 AQAGAPP-----VDMTPWFTDEGADLTRH-------RFDASALEPHIAAPHSP------- 282
              G  P     V+         AD   H        FD S++E ++A P +P       
Sbjct: 320 KLTGREPEQVALVESYAKAAGLWADSLEHAEYERVLEFDLSSVERNLAGPSNPHRRLPTK 379

Query: 283 -ANSHGVSRYA-------------DTPVDVAYIGACTGAKLDDLRAAAQVLR------GH 322
             ++ G++  A             D  V +A I +CT         AA +L       G 
Sbjct: 380 DLSARGIAIPAQQREAQQAEGLMPDGAVIIAAITSCTNTSNPRNVVAAGLLAKKANQLGL 439

Query: 323 KVAAGIRLIVAPASIQDQEQAREEGVLQVLMDAGAELFPTACGACSGYGDPMGDDV---- 378
           K    ++   AP S   +   +E G+L  L   G  +   AC  C+G    +   +    
Sbjct: 440 KRQPWVKTSFAPGSKVAKLYLQEAGLLSELEQLGFGIVAYACTTCNGMSGALDPAIQQEI 499

Query: 379 -------TVISTTARNFKGRMGSPTAQVYLGSPYTVAAAALRG 414
                  T + +  RNF GR+     Q +L SP  V A A+ G
Sbjct: 500 IERDLYATAVLSGNRNFDGRIHPYAKQAFLASPPLVVAYAIAG 542