Pairwise Alignments

Query, 1166 a.a., Two-component system sensor histidine kinase from Variovorax sp. SCN45

Subject, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

 Score =  185 bits (469), Expect = 2e-50
 Identities = 135/441 (30%), Positives = 209/441 (47%), Gaps = 55/441 (12%)

Query: 464 TALRRVQRDLEDRADELQRASRYKSEFLANMSHELRTPLNSALILAKLLGDNPQGNLSPE 523
           T +   ++  +    E + ++R ++EFLA MSHELRTPLN  L +++LL   P   L+ E
Sbjct: 457 TTIAEAEKQSQAARREAEESARVRAEFLAKMSHELRTPLNGVLGVSQLLKRTP---LNDE 513

Query: 524 QVKFAESIYSSGNDLLVLINDILDISKVEAGKLEVVPEDVPLRRLAESLETTFRPLAMQK 583
           Q +    + SSG  LL ++NDILD S++E GK  +   +  L+ L  +++  +RPL  +K
Sbjct: 514 QREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRIYRPLCNEK 573

Query: 584 NLSFRLDIRPDAPGSLVTDSQRVEQILKNLLSNALKFTDRGEVAL---VVSGTADGGAAF 640
            L   ++        + +D  R+ QIL NLL+NA+KFT +G + +   ++ G        
Sbjct: 574 GLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIEGDPLAQLVI 633

Query: 641 AVSDSGIGIDPQQHELIFEAFRQADGTTSRRYGGTGLGLSISRDLTQLLGGTLAVQSQPG 700
            V D+GIGI  Q   +IFE F QA+ TT+R YGG+GLGL+I   L ++L G L V S+ G
Sbjct: 634 QVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYG 693

Query: 701 QGSTFVLQLPAKAPQASGNASATQSPIYTPKPAHAPVGQAPAAPATPLAPQPPSPVPAPQ 760
            G+ F +QLP +  +                               P APQ   P P PQ
Sbjct: 694 IGTRFEIQLPIELVE------------------------------KPDAPQQLLPAPDPQ 723

Query: 761 FADDRSLPRDQVRRVLVIEDEPQFAHILYDLAHELGYRCLVAHGAADGFELATQFV---P 817
              D++L      RVL++ED    A I      + G   L      DG +   +      
Sbjct: 724 PLFDKTL------RVLLVEDNHTNAFIAQAFCRKYG---LDVSWVTDGLQAIEELKIHDY 774

Query: 818 DAILLDMRLPDSTGLDVLQRLKDSPHTRHIPIHVVSAA----DNAQGAALQMGAIGYALK 873
           D +L+D +LP   G++  + +K      H+P+ V +      +  + A    GA    +K
Sbjct: 775 DLVLMDNQLPYLDGVETTRTIK---KVLHLPVVVYACTADGLEETRQAFFHAGAEYVLVK 831

Query: 874 PTTRDELMRVFARLEDKLTQK 894
           P     L +     +    QK
Sbjct: 832 PLKEQTLHKALEHFKHHHGQK 852



 Score = 58.2 bits (139), Expect = 3e-12
 Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 6/115 (5%)

Query: 1044 ILLVDDDVRNIFALTSALEQRGAAVEIGRNGREALEKLDQVREIDLVLMDVMMPEMDGLE 1103
            +LLV+D+  N F   +   + G  V    +G +A+E+L ++ + DLVLMD  +P +DG+E
Sbjct: 732  VLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEEL-KIHDYDLVLMDNQLPYLDGVE 790

Query: 1104 ATRRMRADPRFEKMPVI--AITAKAMKDDREQCLAAGANDYLAKPVDLERLFSLL 1156
             TR ++   +   +PV+  A TA  +++ R+    AGA   L KP+  + L   L
Sbjct: 791  TTRTIK---KVLHLPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKAL 842



 Score = 32.3 bits (72), Expect = 2e-04
 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 891 LTQKVKVVLLVEDDDLQRESVMRLIEDDDIEIVAVGSGEEALELLRTRVFDCMITDLRLP 950
           L  K   VLLVED+               +++  V  G +A+E L+   +D ++ D +LP
Sbjct: 725 LFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLP 784

Query: 951 DMQGSDLLKAMAAEEIVSFPPVIVY 975
            + G +  + +   + V   PV+VY
Sbjct: 785 YLDGVETTRTI---KKVLHLPVVVY 806