Pairwise Alignments

Query, 288 a.a., Isocitrate lyase (EC 4.1.3.1) from Variovorax sp. SCN45

Subject, 292 a.a., methylisocitrate lyase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  199 bits (506), Expect = 6e-56
 Identities = 106/234 (45%), Positives = 149/234 (63%), Gaps = 2/234 (0%)

Query: 6   FKNRLARPDVVLAPGVYDALSALVAEQAGFEALYLSGASIAYTRLGRSDIGLTTFTEVAD 65
           F+  LA    +   G  +A  AL+AEQ GF+ALYLSGA +A    G  D+G+T+  +V  
Sbjct: 9   FRQALANSKPLQIVGTTNAYFALMAEQTGFQALYLSGAGVANASYGLPDLGMTSMNDVLI 68

Query: 66  TLARITERVRLPVIVDADTGFGNALNTQRTVRGFERAGAAMIQIEDQTFPKRCGHLDGKA 125
              RIT   +LP++VD DTG+G A N  RT++ FE+ G A + +EDQ   KRCGH   KA
Sbjct: 69  DAGRITSATQLPLLVDIDTGWGGAFNIARTIKEFEKIGVAAVHMEDQVSQKRCGHRPNKA 128

Query: 126 VVPEREMVGKLKAALDARASSDTLILARTDAVAVEGLDAALDRAEAYLACGVDALFIEAL 185
           VV   EMV ++KAA+DAR   + +I+ARTDAVAVEGL+A ++RA+AY+A G D +F EAL
Sbjct: 129 VVSTEEMVDRIKAAVDARTDPNFVIMARTDAVAVEGLEAGIERAKAYIAAGADMIFAEAL 188

Query: 186 RSPEQMDAACSRFAHRVPLLANMVEGGKTPIQNADALQKHGFRIAIFPGGTARA 239
              +Q     ++   + P+LANM E G+T + N + L + G  + ++P GT RA
Sbjct: 189 TELDQYRHFKAQV--KAPILANMTEFGQTQLFNKEELAQAGADMVLYPLGTFRA 240