Pairwise Alignments

Query, 838 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  113 bits (283), Expect = 5e-29
 Identities = 118/423 (27%), Positives = 192/423 (45%), Gaps = 39/423 (9%)

Query: 408  RSIATALAQTNATLADSMRVQQERSEFLLKIKDRLRTD---AERRDQDKSRFLADAIHDL 464
            R    +L   N TL +  RV Q   E L K+  +L T    +ER  Q KSRFLA   HDL
Sbjct: 744  REAEQSLKMANETLEE--RVLQRTLE-LEKLNKQLVTATQRSERESQSKSRFLAAVSHDL 800

Query: 465  RQPLQVIGNALNPIGGAI-RAGHTVNALNLAQMATRAAGNMRSQLAAILDLSRLESGFVK 523
             QPL    NA      ++           LA     A G     ++ +LD+SRLESG + 
Sbjct: 801  MQPL----NAARLFASSLSEVAKEAEVQKLAHHIESALGAAEDLISDLLDISRLESGKID 856

Query: 524  AELSDFDLVTLVRDTVEQTRAIAQESGTCVEFDPPLGKPVFVRSDRHFLQRILLNLVSNG 583
                 F ++ ++ +   +  A+A + G      P L   ++V SD   L+R++ N ++N 
Sbjct: 857  LHPHSFAIMDVLSNLNAEFSALAAKQGVQFSLVPSL---LWVHSDPKLLRRVIQNFLTNA 913

Query: 584  IKYRSADGGRRSHVRLLLTTHGQLTHLAIQDNGLGIPEEVLQSNVIFKPFFQLNNRHAEA 643
             +Y + +G     VR + T  GQ+  + + DNG+GI ++  Q   IF+ F +       +
Sbjct: 914  FRY-NPNGKVILGVRRVAT--GQV-RIDVWDNGIGIEQDKQQE--IFEEFNR--GGQVRS 965

Query: 644  EKGVGLGLSIVSALLDLLDNHQLSIQSEVGVGSTFTLEIPASVIAPVFEAIPHDDFMAGG 703
            ++G+GLGL+I   +  +L +H +S++S  G GS F++ +  +   P+  ++     M   
Sbjct: 966  DQGLGLGLAISKGIAHVLGHH-ISMRSWPGQGSVFSITLDRA--QPMPSSLTQTVAMVNE 1022

Query: 704  IEAARGKYVVLLEDDELVRQSLAAVFNAHGVLYEAWGSIEEMRQQLPFTERA------PD 757
              +      VL  D+E        +      L E WG   +    +  + +A      PD
Sbjct: 1023 KGSELQHLRVLCVDNE------PDILVGMRDLLERWGCEVKTATDIHGSLKALEGQWIPD 1076

Query: 758  VLLSDYRLPDGKTALDAIELMRSHWSDVPTLILTGESLNSYALTSLR--GIAICYKPVAP 815
            V+LSDYRL +G+T L+ ++  R    D    ++     N   L  +   G     KP+ P
Sbjct: 1077 VILSDYRLDNGRTGLEVLQQCRLRLGDCFAGVIISADRNPDILDGIESSGFRFMAKPIKP 1136

Query: 816  LDL 818
            L L
Sbjct: 1137 LKL 1139