Pairwise Alignments

Query, 176 a.a., Sigma factor PvdS, controling pyoverdin biosynthesis from Variovorax sp. SCN45

Subject, 165 a.a., RNA polymerase sigma factor, sigma-70 family from Pseudomonas stutzeri RCH2

 Score = 60.1 bits (144), Expect = 2e-14
 Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 5/155 (3%)

Query: 14  EVFIANRPQLQRVAQKIVRTADLADEVLQDAYLKLADGAAVRDVRKPLGYCCQVVRNVAF 73
           + +I +R QL     ++     LA+++ QDA+LKLA     + +  P  Y  ++  N+  
Sbjct: 13  QCYIHHRQQLVAHLTRLGGCRALAEDLAQDAWLKLAQIMPEQRLDNPKAYLFRIATNLLR 72

Query: 74  DYHRHHSV-EASYRTYCEDVELVSPPSNDAPERVLDGRQALAAIDRVLDALPARTRTAFE 132
           D  R  ++  AS     E +E V       P  +++   AL  + R L  LP R R  FE
Sbjct: 73  DAMRRRALLGASDEGPLELIEAVQAD----PCALVENHCALQCVLRQLADLPPRCREVFE 128

Query: 133 LNRLSGMTQREIGVRLGCSATLVNFMIKDADAALE 167
           L RL G++Q EI  RLG S   V   +  A   LE
Sbjct: 129 LARLEGLSQAEIAERLGISVNTVIAQLAKARQRLE 163