Pairwise Alignments

Query, 559 a.a., ABC-type siderophore export system, fused ATPase and permease components from Variovorax sp. SCN45

Subject, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score = 94.4 bits (233), Expect = 1e-23
 Identities = 123/518 (23%), Positives = 210/518 (40%), Gaps = 59/518 (11%)

Query: 58  GLLLTFVALCAVALVGRAISDISNNVVGQRLVAQVRKDLAQKILAAPIDALERYRMHRLM 117
           GL++T V    + +V R + +        R+  Q+   L Q +   P+     +   R +
Sbjct: 204 GLVITGV----IEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPL----MFFKSRQV 255

Query: 118 PVLTQDVDMISDVAFMLAATMISLAIAL----GCLGYLAWLSLPLFGLLVVAMLIGVAVQ 173
             +   V  +  +   L  +M +L + L      L  ++ LS PL GL +  +   V + 
Sbjct: 256 GAIVTRVRELDTIREFLTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLA 315

Query: 174 TWAHGRGIAG----FFQSREQEELLHKAYRGISEGAKELRMHRA--RRAKVYEGQIARTV 227
            W   R  A     F  +      L +   G SE  K L +     RR      ++  T 
Sbjct: 316 WWLTPRMQAAIEKQFSHAAANTSFLTETVAG-SETLKSLAVEPRFIRRWDEQTEKMVTTG 374

Query: 228 DNIRDINRRAINTFVLATSFGSALFFLLIALILGWAAWRTTEPVV--LSGFVLVLLFIKG 285
            +++ +N R+ +   L     S        L LG     + E  +  L  F ++   I  
Sbjct: 375 YDVQQLNNRSNHLVQLLQKITSVAI-----LWLGATEVLSLEMTIGQLIAFNMMTNHIAQ 429

Query: 286 PIDQIVGALPHLGRARVAFERIADLSARFATPEPHLHLGSPPTSPPLRNAIELRGV--RY 343
           P+ ++V       + RVA E++ D+           H GS   +  +  AI  + +  RY
Sbjct: 430 PLARMVELWGQFIQTRVAIEKLGDM----LNLPVEQHTGSDNVT--ISGAISFKNILFRY 483

Query: 344 AFDTPEGSEAFVLGPVDLQIGRSEIVFIVGDNGSGKTTLIKLLLGLYVPHQGEVVLDGKP 403
             D P       +  + L I   E + +VG +GSGK+TL +LLL LY P QG + +DG P
Sbjct: 484 QPDIPP-----TINDLSLDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIP 538

Query: 404 VTPETRDDYRQLFTTVFSDFYLFEDLVAGEEGGHQALPETAL-------------PYLQR 450
           +        RQ    V  + +LF   V+  E   Q+ PE +L              ++ +
Sbjct: 539 LNHINVQQLRQRVGVVLQENFLFHKSVS--ENIAQSKPEASLEEIIEAAKLSGAHDFILK 596

Query: 451 LEIAHKVSVKDGAFSTTDLSTGQRKRLALVHAYLEGRPVLVFDEWAADQDPTFRHLFYTE 510
           L + +   + +G  S   LS GQR+RLA+    L    VL+ DE  +  D   + +    
Sbjct: 597 LPMGYDTVLAEGGQS---LSGGQRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQAN 653

Query: 511 LLPELRAKGHSLVVISHDDRYFHVADRIVHMKAGRVAQ 548
           +     A+G +++ I+H        DRI+ +  G + +
Sbjct: 654 MAS--IARGRTVITIAHRLSTVRDCDRIIVLHQGTIVE 689