Pairwise Alignments

Query, 288 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 299 a.a., Cyn operon transcriptional activator from Pseudomonas fluorescens FW300-N2E2

 Score = 97.4 bits (241), Expect = 3e-25
 Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 5/229 (2%)

Query: 7   KSIRCFHAVAKTGGFTSAAQYLHIGQPTVTEQVKALETRFGVELFLRAGRSVRLTAVGER 66
           + ++ F AVA+   FT AA  LH+ QP +++QV+ LE   G +LF R+GR+ RLT  G+ 
Sbjct: 8   RHVQYFLAVAEHLSFTKAAAALHVSQPALSQQVRQLEESLGAQLFDRSGRTTRLTDAGDV 67

Query: 67  LYAITQGLFGQEEEAIQFLQSAHKLKTGVVRVGAVSPPIALELA----HGFRQAHPSLEL 122
                +  + Q  EA   +     L  G +R+ AV+P     L       F   +P + L
Sbjct: 68  YLLYARRAYQQLREAKSAIHDVSDLTRGSLRL-AVTPTFTTYLVGPVIKAFHSRYPKITL 126

Query: 123 TVSIGSEDSTLRGLQDFDIDVGIMVEPTAIEGLHIVPYRDERIVAVVPENHPWLTRASVG 182
            +   S++     L   ++D GI  +      +  +P  +E +  VV   H      S+G
Sbjct: 127 NLKEISQERIEELLLAGELDAGIAFDEINTPNIDAIPLLNETLALVVSRQHRLAEERSIG 186

Query: 183 TRDIEEEMVILREPGSKTRHRVERACQKRNVRLNCVMEINSREAILHAV 231
            +D+  E +IL  P   TR +++R  +   +     ME N+  A++  V
Sbjct: 187 LQDLNAESLILLSPEFATREQIDRYFRTHAIHPQVQMEANALGAVIEIV 235