Pairwise Alignments

Query, 288 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 330 a.a., rubisco operon transcriptional regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 99.4 bits (246), Expect = 1e-25
 Identities = 62/241 (25%), Positives = 117/241 (48%), Gaps = 2/241 (0%)

Query: 3   HQYYKSIRCFHAVAKTGGFTSAAQYLHIGQPTVTEQVKALETRFGVELFLRAGRSVRLTA 62
           H  ++ +  +  V + G  ++AA+ LH+ QPTV+ Q+K L    G  L       +  T 
Sbjct: 13  HLSFRLLEVYVQVVRLGNISAAARALHLTQPTVSLQLKKLADILGEPLLNSTDGRMSPTL 72

Query: 63  VGERLYAITQGLFGQEEEAIQFLQSAHKLKTGVVRVGAVSPP--IALELAHGFRQAHPSL 120
           VG+ LY        + E+   F+Q A     G + +G V+    +   +   F +  P +
Sbjct: 73  VGQELYRAACDTLSRFEDVNAFIQQARGGSVGHINIGLVTTAKYVVPRILGAFYRQFPQV 132

Query: 121 ELTVSIGSEDSTLRGLQDFDIDVGIMVEPTAIEGLHIVPYRDERIVAVVPENHPWLTRAS 180
           ++T++IG+    L   +  + D+ +   P + E +         +  + P++H  + R  
Sbjct: 133 KVTLNIGNRAHILGRFERQEDDLYLFSHPPSGEQVLSARIIKNPLQLIAPKDHWAVNRQQ 192

Query: 181 VGTRDIEEEMVILREPGSKTRHRVERACQKRNVRLNCVMEINSREAILHAVANGMGIGFV 240
           +   ++++E  I+REPGS TR   E  C  + + L+  M+I S EAI  +VA+G+G+  +
Sbjct: 193 IRFSELKQERFIMREPGSATRLMFESWCSAQGIALSDTMQIESNEAIRLSVASGLGLSVI 252

Query: 241 T 241
           +
Sbjct: 253 S 253