Pairwise Alignments

Query, 274 a.a., Phosphonate ABC transporter permease protein PhnE (TC 3.A.1.9.1) from Variovorax sp. SCN45

Subject, 664 a.a., amino acid transport sytem, permease protein from Phaeobacter inhibens DSM 17395

 Score = 55.1 bits (131), Expect = 4e-12
 Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 8/186 (4%)

Query: 89  TLLGVLPAIPLSFLAARNLQSNRWVYQ---GTR---QALNVVRSINELILALVFVSAVGL 142
           TL  VL A+P+   A   L +  W Y+   G R     L+++++I      +  +   G 
Sbjct: 156 TLASVLIAVPIG--AGGGLLTGIWAYRHPVGERILSPLLDLMQTIPIFAYLVPILFMFGF 213

Query: 143 GPFPGVLALALHGAGMLGKFFADAIEEIDQGPLEALRATGARPLQVIVFGVLPQVLTAWI 202
           GP   ++A  ++    + +    A++ +D   L+  R  G  P Q++   ++P    + +
Sbjct: 214 GPVSALVATIIYATPPMIRVTILALKSVDPEILDFGRMAGTTPRQLMWRVLVPSASQSLM 273

Query: 203 AVVLYRFEVNLRSATVLGMVGAGGLGFELVSSLKLFRYPETATCIIIITVMVIVADTLSS 262
             V     + L    +  M+GAGGLGF+++++L+           I I V+ I  D LS 
Sbjct: 274 VGVNQVIMLTLNMVIIASMIGAGGLGFDVLAALRRLDIGAGFEAGIAIVVLAIAVDRLSQ 333

Query: 263 QLRHRI 268
               R+
Sbjct: 334 AFAERM 339



 Score = 44.3 bits (103), Expect = 7e-09
 Identities = 51/250 (20%), Positives = 98/250 (39%), Gaps = 28/250 (11%)

Query: 21  WFNLLVGACILG----WALQ------WSADGAQLSWSELAAGLPQIVDFLSRTLPPDMHI 70
           WF L +   +LG    WA+       W A G +L+   +   +  ++ F           
Sbjct: 417 WFMLPIKKTLLGIPWPWAVAMLTLVGWRAGGLRLAL--MCGSMSTLIAF----------- 463

Query: 71  LSRLVAPALETVQIAVWGTLLGVLPAIPLSFLAARNLQSNRWVYQGTRQALNVVRSINEL 130
            S L A A+ TV +     +L  L  +PL  LAA N ++   +       ++ ++++   
Sbjct: 464 -SGLWAKAMVTVYLCGASVILATLIGVPLGVLAALNKRAGVAI----GLFIDTLQTLPSF 518

Query: 131 ILALVFVSAVGLGPFPGVLALALHGAGMLGKFFADAIEEIDQGPLEALRATGARPLQVIV 190
           +  +  V    +G F  ++A+ L+      ++ A  +  +    +EA   +G    Q++ 
Sbjct: 519 VYLIPVVMLFRVGDFTAMIAIVLYALAPAVRYAAHGMRSVSGELIEAGLVSGCTRWQLLR 578

Query: 191 FGVLPQVLTAWIAVVLYRFEVNLRSATVLGMVGAGGLGFELVSSLKLFRYPETATCIIII 250
              LP  L   +  +     + L    +  +VG   LG E+  +L            + I
Sbjct: 579 MVRLPMALPEILLGINQTIMLALSMLVITALVGTRDLGQEVYIALTKADTGRGLVAGLAI 638

Query: 251 TVMVIVADTL 260
             + I+AD L
Sbjct: 639 AFIAIIADRL 648