Pairwise Alignments

Query, 1457 a.a., Uncharacterized ATP-dependent DNA helicase PA3272 from Variovorax sp. SCN45

Subject, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

 Score = 62.8 bits (151), Expect = 7e-14
 Identities = 87/368 (23%), Positives = 142/368 (38%), Gaps = 58/368 (15%)

Query: 18  FPSPTSAQAEAWPAIRAGRDTLVAAPTGSGKTLTAFLAALDELVRRGLEPGGLPDETAVV 77
           F   T  Q +A P   AGRD L ++ TGSGKTL   L  L + ++   +     D   ++
Sbjct: 25  FKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPMLHKSLK--TKAFSAKDPRGLI 82

Query: 78  YVSPLKALSNDIRLNLDAPLAGIRAELAALGLPDVDIRTAVRTGDTPQRERQQSLRRPPH 137
            V P + L+  +   L + L G+                 + TG     ++ ++L R P 
Sbjct: 83  LV-PTRELAKQVYGELRSMLGGL------------SYTATLITGGENFNDQVKALARGPR 129

Query: 138 VLVTTPESLYVLLGSTSGRRMLGTVRSVIVDEIHAV-----AASKRGSHLALSLERLQ-- 190
            +V TP  L   L   S    L  + ++++DE   +     A   R  H A    R Q  
Sbjct: 130 FIVATPGRLADHLDHRS--LFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRRRQTL 187

Query: 191 --ARCLAHSGVRPVRIGLSATQKPIDEVARFLVGAGA-LRADGTADCAVVDIGYAKQRDL 247
             +  L H+ V  + + L      ++E  R  +G G+    D T    + D         
Sbjct: 188 MFSATLDHADVNDMAMEL------LNEPKRIAIGVGSEEHKDITQHFYLCD--------- 232

Query: 248 ALELPPTPLEAVMSGGQWTQVYARVAELVWLHKTTLVFVNTRRMAERTARHLGDILGKEA 307
            L+     L+ +++  ++ QV              ++F  TR   +R    L        
Sbjct: 233 HLDHKEALLDRILADAEYRQV--------------IIFTATRADTDRLTEKLNQ--NNLK 276

Query: 308 VAAHHGSLSKETRLDAEQRLKRGALKVLVATASLELGLDIGDVDMVCQIGSPRAIATFLQ 367
             A  G+L++  R     + +R   K+LV T     GLDI  V  V     P+    ++ 
Sbjct: 277 AVALSGNLNQTQRNTIMGQFERAVFKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVH 336

Query: 368 RAGRSGHA 375
           R GR+G A
Sbjct: 337 RVGRTGRA 344