Pairwise Alignments

Query, 523 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 543 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  137 bits (346), Expect = 8e-37
 Identities = 121/476 (25%), Positives = 213/476 (44%), Gaps = 42/476 (8%)

Query: 57  EGLVGYRMDGSVGPLLAQSVDVSADGLTYTFKLRKGVKFHNDAPLTSADVAWNWKRYMDP 116
           E L+ Y  D +  PLLA    VS DGL Y FKLR+ V++H+    T+  VA++     + 
Sbjct: 78  ESLLSYDKDFNPQPLLATEWTVSEDGLRYWFKLRQDVRWHDGRDFTAEAVAFSILALKEN 137

Query: 117 KTDWRCTSEYDGRNGLKVVETATPDAGTFVMKINKPSAVFLDTLARTDCGMT-AILHKSS 175
               R T  +       V E    ++    + + KP+   L   A  +  +    L++ +
Sbjct: 138 HPRGRATFAH-------VKEANVLNSHEVELTLAKPAPYLLTAFASFEAPIVPKHLYEGT 190

Query: 176 LKADGSWD-KPVGTGPFKFGEWKRGEYVTLTAFKGYTSTPGATKSDGYIGLKAPLVDSVK 234
             A+   +  PVGTGP+KF EW RG +                +++ Y G   P +D + 
Sbjct: 191 KIAENPHNVAPVGTGPYKFVEWVRGSHALF------------VRNEDYWGSPKPYLDQII 238

Query: 235 FLVVPDAATAAAGLKSG--AIDAGQITSSDAQELKNDRNLAVQAPPEAIKNVLL---IQT 289
           F  + D A A A +++G   +    +  +D   LK + NL V   P      +       
Sbjct: 239 FRFIVDPAAAVAAIETGEVQVSTANLPLTDIDRLKANPNLVVDTDPAPYSPSIARAEFNL 298

Query: 290 RDPLLKNQKLRQAIAASLDIEQIVAAASEGLGSVNNSAIHKGSAFYSAAQKKGWHYDPAQ 349
            +  L + K+R AIA ++D + IV     G  +  +  +    A + +     + +DPA+
Sbjct: 299 ENKYLADIKVRHAIAHAVDKDFIVNTVYLGYATRLDGPVSPDLAKFYSPDLPKYEFDPAK 358

Query: 350 AAKLLREAGY-KGE-----KITIQTNKRAHVPSYTVAVLAQAMMQSVGINAQLEVLEWAT 403
           + KLL EAGY +G      K+ I   + +  P  T   +AQA+ + VGI  +L   ++AT
Sbjct: 359 SEKLLDEAGYARGADGFRFKLFIDPTQPSGPPKQTAEYIAQALAK-VGIKVELRTQDFAT 417

Query: 404 QLDR-YNSGNYQISSFSYSSRLDPALSYEQFSGPKDKQ------SRKVWEDPQALKLIDD 456
            + R +   ++ I+    S+  DP +  ++    K+ +      +   + +P+  +L++ 
Sbjct: 418 FVKRVFTDRDFDIAIEGMSNLYDPTVGVQRLYWSKNFKPGVPFTNGSKYSNPEVDRLLET 477

Query: 457 SFAESDPKKRQALFDQIHGLMIQQVPMVMLFNGIDAWAVRKRVSGFAVWEGKPRLW 512
           +  E DPKKR  LF++   L+++ +P + +          KRV    +  G   LW
Sbjct: 478 AAVEIDPKKRLELFNEFQKLVVEDLPTLDIVTPAVITVYDKRVKNLKL--GVEHLW 531