Pairwise Alignments

Query, 662 a.a., Two-component system sensor histidine kinase/response regulator hybrid from Variovorax sp. SCN45

Subject, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

 Score =  143 bits (360), Expect = 3e-38
 Identities = 153/523 (29%), Positives = 239/523 (45%), Gaps = 51/523 (9%)

Query: 147 ARFRAIYDHAPTGIALIDAQGCFADVNPALVAMLGQSREVLVG-QPVSAFAPDEWTAFVK 205
           A  R+  D +P  I   +A+G F+  N A+  + G+    LVG  P   +  +   + V+
Sbjct: 155 ALLRSFIDASPDLIYYRNAKGEFSGCNRAMEELTGKRESELVGLTPWDVYRKEIAQSIVE 214

Query: 206 THTQGVQPPSA----PWTGEFPLLRLDGSWIR-LEWTMSGHIEPGLRVGIALDVSERFEL 260
           T  Q     +A     W  E+P  R     +R + +        GL VG   D++ER   
Sbjct: 215 TDQQVFNNNTAITYEQWL-EYPDGRKSFFELRKVPFYNKDGRHLGL-VGFGRDITER--- 269

Query: 261 EARRREVLEREQAARVAAERLSRTKDDFVAVLSHELRNPLNVIGGWVHVLKAGGRTPEQM 320
             R  E L          E+ SR K  F++ +SHELR PLN I G   +L     + EQ 
Sbjct: 270 -KRHEESL----------EKASRDKTTFISTISHELRTPLNGIVGLSRMLLDTPLSGEQ- 317

Query: 321 EKGLTAIDRSVKAQTRLIADILDVSRISSGKLRLHREWAEPRSLVSAAIEALMAPVAAKR 380
            K L  I+ S      +  DI+D+ +    KL L          V A IE L A + A++
Sbjct: 318 RKHLQTINVSAVTLGNIFNDIIDMDKFDRRKLELFPAALNFEEFV-AEIEVL-AALMAEQ 375

Query: 381 LNILFDRQE-ADPPAW--LDATRFQQIVWNLLSNAIKFSDEGGRIL---IQLQRQDHMLH 434
             + FD +   D P+   +D+TR +Q++WNLLSNA+KF+ EGG ++    +   Q   + 
Sbjct: 376 KGLRFDLERLTDLPSLVEVDSTRLRQVLWNLLSNAMKFTKEGGVVMTVSAECDAQHAEIT 435

Query: 435 LSVQDFGRGIRADFLHHLFDRFSQSDSPDNRLHG-GLGLGLSIVKNLAELHGGSVSAHSE 493
           + V+D G GI       +F  + Q  S  + LH  G G+GL++ + L +L GG +S +SE
Sbjct: 436 IEVEDTGIGIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIGLAVSRQLIKLMGGDISVNSE 495

Query: 494 GEGLGATLRVTLGVIPSDDTPLLLVDALDSRAGGAAAVTDRTLHGLDVLLVEDNADASEI 553
            EG G+T  VT+ V      PLL    ++                L++ +VED      +
Sbjct: 496 -EGFGSTFTVTIRV------PLLAEAPIEIE-------PQEPQTELNIFMVEDIELNITV 541

Query: 554 ITVVLADAGATVRLALDVEGALQLFDQKWPDVLISDIGLPGRDGYDLIREVRQRERTLGK 613
              +L   G  V +A+  E A+Q F+    D++  DI LP   G+D+    R    +L  
Sbjct: 542 ARSLLESMGHKVTVAMTGEEAIQGFNPTEYDLVFLDIQLPDMTGFDIAHYYRTHYSSL-- 599

Query: 614 PRLFSIAHTAFTRPQDLAKTTEAGFDAHLGKPLQPHALVALVA 656
           P L ++        +D  +  + G DA + KPL   A+  ++A
Sbjct: 600 PPLVALTANVL---KDKEEYRQKGMDAAISKPLSVAAVREVIA 639



 Score = 42.7 bits (99), Expect = 6e-08
 Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 9/135 (6%)

Query: 18  VLVVDDNPTTRYATARTIRAAGFQTREAGTGGEAL-ALASQHISAVVLDVHLPDFTGFEV 76
           + +V+D           + + G +   A TG EA+          V LD+ LPD TGF++
Sbjct: 529 IFMVEDIELNITVARSLLESMGHKVTVAMTGEEAIQGFNPTEYDLVFLDIQLPDMTGFDI 588

Query: 77  CHELRIKPSTATLPVVHLSATFVRNEDKVAGLNAGADAYLVHPVEPPVLIATLQALIRAR 136
            H  R   S+   P+V L+A  ++  DK      G DA     +  P+ +A ++ +I A+
Sbjct: 589 AHYYRTHYSSLP-PLVALTANVLK--DKEEYRQKGMDA----AISKPLSVAAVREVI-AK 640

Query: 137 MAEEKQRNSEARFRA 151
           M +     S A+ ++
Sbjct: 641 MTQHHAGESVAKVKS 655