Pairwise Alignments

Query, 662 a.a., Two-component system sensor histidine kinase/response regulator hybrid from Variovorax sp. SCN45

Subject, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  157 bits (396), Expect = 2e-42
 Identities = 122/394 (30%), Positives = 190/394 (48%), Gaps = 23/394 (5%)

Query: 272 QAARVAAERLSRTKDDFVAVLSHELRNPLNVIGGWVHVLKAGGRTPEQMEKGLTAIDRSV 331
           +A +V A+  ++ K  F+A LSHE+R P+N + G   +L     T +Q +  LT++  S 
Sbjct: 344 EAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQH-LTSLYESG 402

Query: 332 KAQTRLIADILDVSRISSGKLRLHREWAEPRSLVSAAIEALMAPVAAKRLNILFDRQEAD 391
           +    L+ +ILD S+I  GK  L       +S++ +      +    K L    + +  D
Sbjct: 403 EHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGLKFQLNSEITD 462

Query: 392 PPAWL-DATRFQQIVWNLLSNAIKFSDEGGRILIQLQRQ----DHMLHLSVQDFGRGIRA 446
              +  D  R +QI++NLLSNA+KF+ E G + I L  +    ++ L + VQD G GI  
Sbjct: 463 GRWYYGDKARLRQIIFNLLSNAVKFT-EAGFVAIGLSEESCDEENYLIIKVQDTGIGIAQ 521

Query: 447 DFLHHLFDRFSQSDSPDNRLHGGLGLGLSIVKNLAELHGGSVSAHSE-GEGLGATLRVTL 505
           + L  +F  F Q++S   R  GG GLGL+IVK +AEL  G+V   SE G+G    +RV L
Sbjct: 522 ESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQGSCFKVRVKL 581

Query: 506 GVIPSDDTPLLLVDALDSRAGGAAAVTDRTLHGLDVLLVEDNADASEIITVVLADAGATV 565
            +     T  +  D   ++A        +T  GL VL+VEDN     I+   + + G   
Sbjct: 582 AI-----TEPVTEDVKPTKA--------KTYPGLRVLIVEDNRTNIMILEAFMRNKGFEC 628

Query: 566 RLALDVEGALQLFDQKWPDVLISDIGLPGRDGYDLIREVRQRERTLGKPRLFSIAHTAFT 625
              +D   A+    +   D+++ D  +P +DG    RE+RQ      K  LF      F 
Sbjct: 629 HSVMDGVQAITALQESSFDLVLMDNHMPLKDGIQATREIRQLPLPQAKILLFGCTADVFK 688

Query: 626 RPQDLAKTTEAGFDAHLGKPLQPHALVALVAGHA 659
             +D  K   AG D  + KP+  H L   +  H+
Sbjct: 689 DTRD--KMLSAGADDIIAKPIAEHELDMALEQHS 720



 Score = 40.0 bits (92), Expect = 4e-07
 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 1/104 (0%)

Query: 18  VLVVDDNPTTRYATARTIRAAGFQTREAGTGGEAL-ALASQHISAVVLDVHLPDFTGFEV 76
           VL+V+DN T        +R  GF+      G +A+ AL       V++D H+P   G + 
Sbjct: 604 VLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAITALQESSFDLVLMDNHMPLKDGIQA 663

Query: 77  CHELRIKPSTATLPVVHLSATFVRNEDKVAGLNAGADAYLVHPV 120
             E+R  P      ++      V  + +   L+AGAD  +  P+
Sbjct: 664 TREIRQLPLPQAKILLFGCTADVFKDTRDKMLSAGADDIIAKPI 707