Pairwise Alignments

Query, 662 a.a., Two-component system sensor histidine kinase/response regulator hybrid from Variovorax sp. SCN45

Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  179 bits (455), Expect = 6e-49
 Identities = 168/541 (31%), Positives = 248/541 (45%), Gaps = 50/541 (9%)

Query: 127 ATLQALIRARMAEEKQRNSEARFRAIYDHAPTGIALIDAQGCFADVNPALVAMLG-QSRE 185
           A  Q L   ++ E+ Q N E     I D  P  +  + A G F  VN   + ++G  + E
Sbjct: 457 AEQQRLAERKVLEQSQLNQE-----ILDATPNPMYCLSADGKFLTVNAKFLDLMGLYNNE 511

Query: 186 VLVGQPVSAFAPDEWTAFVKTHTQGVQPPSAPWTGEFPLLRLDG---SWIRLEWTMSGHI 242
           V+  +P   F  +    F   H    Q  S+    E  L+   G     +  E + S   
Sbjct: 512 VIDKEPQEIFPAEVAERFAAAHQVLTQQQSSQ-NYEVSLVDYTGVQREMLVYEASFSDRA 570

Query: 243 EP--GLRVGIALDVSERFELEARRREVLEREQAARVAAERLSRTKDDFVAVLSHELRNPL 300
           +   G+ VGI LD++ER E+E   R+       A+ AA+ +S+ K DF+A +SHE+R P+
Sbjct: 571 DKVNGI-VGILLDMTERKEMEDELRK-------AKEAADAMSQAKGDFLANMSHEIRTPM 622

Query: 301 NVIGGWVHVLKAGGRTPEQMEKGLTAIDRSVKAQTRLIADILDVSRISSGKLRLHREWAE 360
           N I G  H L           K +T I+ S K    +I DILD S++ +GKL + R    
Sbjct: 623 NAILGMAH-LALNTPLDTTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFN 681

Query: 361 PRSLVSAAIEALMAPVAAKRLNILFDRQEADPPAWL-DATRFQQIVWNLLSNAIKFSDEG 419
              ++      +      K +  L D     P   + D  R  Q++ NL  NA+KF+ +G
Sbjct: 682 LDDVLDNVTAVVSLKAQEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQG 741

Query: 420 GRILI----QLQRQDHMLHLSVQDFGRGIRADFLHHLFDRFSQSDSPDNRLHGGLGLGLS 475
             +L     QL  Q   L  +V+D G GI  D L  LFD FSQ+D+   R +GG GLGLS
Sbjct: 742 EIVLSARVSQLNEQQVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLS 801

Query: 476 IVKNLAELHGGSVSAHSEGEGLGATLRVTLGVIPSDDTPLLLVDALDSRAGGAAAVTDRT 535
           I K L EL GG ++ HSE EG G+T   ++ V    D  +  +               + 
Sbjct: 802 ISKQLVELMGGQITVHSE-EGKGSTFEFSV-VCGLQDAKMRDI--------------SQP 845

Query: 536 LHGL---DVLLVEDNADASEIITVVLADAGATVRLALDVEGALQLFDQKWPDVLISDIGL 592
           +HGL    VL+V+DN  A  I+  +L      V    +   AL    QK  D+L  D  +
Sbjct: 846 VHGLADKRVLVVDDNDSARHILDSLLTAMRFNVVTVSNGFEALSEIQQKPFDMLFVDWNM 905

Query: 593 PGRDGYDLIREVRQRERTLG-KPRLFSIAHTAFTRPQDLAKTTEAGFDAHLGKPLQPHAL 651
           PG +G +L+  V    +TLG +  + S   TA+ R  +L        DA + KP+ P  L
Sbjct: 906 PGMNGIELLTRV----KTLGLRGHMKSFLVTAYGREINLDGENSKLVDALIVKPVNPSNL 961

Query: 652 V 652
           +
Sbjct: 962 L 962



 Score = 50.8 bits (120), Expect = 4e-10
 Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 3/110 (2%)

Query: 538  GLDVLLVEDNADASEIITVVLADAGATVRLALDVEGALQLFDQKWPDVLISDIGLPGRDG 597
            G  +LLVEDN    E+   +L D G  V +A   + AL+  +    D+++ D+ +P  DG
Sbjct: 991  GQSLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDG 1050

Query: 598  YDLIREVRQRERTLGKPRLFSIAHTAFTRPQDLAKTTEAGFDAHLGKPLQ 647
                  +R   R    P    +A TA     D+ +  +AG + HL KP++
Sbjct: 1051 ITATEHIRANPRWHSLP---IVAMTANAMAIDIERCLQAGMNDHLSKPIE 1097



 Score = 36.6 bits (83), Expect = 8e-06
 Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 8/150 (5%)

Query: 18  VLVVDDNPTTRYATARTIRAAGFQTREAGTGGEALA-LASQHISAVVLDVHLPDFTGFEV 76
           VLVVDDN + R+     + A  F       G EAL+ +  +    + +D ++P   G E+
Sbjct: 854 VLVVDDNDSARHILDSLLTAMRFNVVTVSNGFEALSEIQQKPFDMLFVDWNMPGMNGIEL 913

Query: 77  CHELRIKPSTATLPVVHLSATFVRNEDKVAGLNAG-ADAYLVHPVEPPVLIATLQALIRA 135
               R+K       +     T    E  + G N+   DA +V PV P  L   L A++ +
Sbjct: 914 L--TRVKTLGLRGHMKSFLVTAYGREINLDGENSKLVDALIVKPVNPSNL---LDAIVTS 968

Query: 136 RMAEE-KQRNSEARFRAIYDHAPTGIALID 164
              E  + + +EA   +  + A   + L++
Sbjct: 969 YGIEHVRHKTNEAHHNSRPNFAGQSLLLVE 998