Pairwise Alignments

Query, 292 a.a., Putative SigmaB asociated two-component system sensor protein from Variovorax sp. SCN45

Subject, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

 Score =  141 bits (355), Expect = 6e-38
 Identities = 81/265 (30%), Positives = 143/265 (53%), Gaps = 8/265 (3%)

Query: 20  RREVDELRAELEETNRGVVALYAELDAQAEQLKKATELKSRFLAYMSHEFRTPISAIRSI 79
           +  +D+  ++L ET   +     ELD   ++ ++A  +KS FLA MSHE RTP++ +   
Sbjct: 253 QHSIDQATSDLRETLEQLEIQNVELDIAKKRAQEAARVKSEFLANMSHELRTPLNGVIGF 312

Query: 80  ARLLSDRVDGPLTQEQEKQVGFIDGTATELAEMVDDLLDLAKIEAGRVDISPAWFEMVDL 139
            R +   +   LT  Q   +  I+ +A  L  +++D+LD +K+EAG++ +    FE  ++
Sbjct: 313 TRQM---LKTQLTNSQADYLQTIEKSANNLLTIINDILDFSKLEAGKLALENIPFEFQEV 369

Query: 140 FSALRGMFRPVLHNPATALIFEEPEGLPK-LYTDDRKLSQILRNFISNALKFTPQGEVRV 198
              +  +     H     +  +    +P+ +  D  ++ Q+L N + N++KFT +G + V
Sbjct: 370 LEEVVNLQATSAHEKGLEITLKIDPKIPRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDV 429

Query: 199 T----AMRVGEDSLKFSVSDTGIGIAPEHHAAVFDDFSQVDSPVQKRLRGTGLGLSLSRQ 254
           +    A+R     L+F V DTGIGI+    A +F  FSQ D+ + +R  GTGLGL ++++
Sbjct: 430 SVEMRALRDDVIDLQFMVRDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGLVITQK 489

Query: 255 LAVLLGGHVEVASELGKGSVFSVTV 279
           L   +GG + + S L +GS F  T+
Sbjct: 490 LVSHMGGEISLTSRLHQGSTFWFTL 514