Pairwise Alignments

Query, 292 a.a., Putative SigmaB asociated two-component system sensor protein from Variovorax sp. SCN45

Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  148 bits (373), Expect = 8e-40
 Identities = 96/269 (35%), Positives = 149/269 (55%), Gaps = 17/269 (6%)

Query: 36  GVVALYAELDAQAEQLKKATEL-------KSRFLAYMSHEFRTPISAIRSIARLLSDRVD 88
           G++    E     ++L+KA E        K  FLA MSHE RTP++AI  +A L    ++
Sbjct: 578 GILLDMTERKEMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLA---LN 634

Query: 89  GPLTQEQEKQVGFIDGTATELAEMVDDLLDLAKIEAGRVDISPAWFEMVDLFSALRGMFR 148
            PL   Q K V  I+ +A  L  +++D+LD +K+EAG++++    F + D+   +  +  
Sbjct: 635 TPLDTTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVS 694

Query: 149 PVLHNPATALIFEEPEGLPK-LYTDDRKLSQILRNFISNALKFTPQGEV----RVTAMRV 203
                     + +    +P  L  D  +L Q++ N   NA+KFT QGE+    RV+ +  
Sbjct: 695 LKAQEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNE 754

Query: 204 GEDSLKFSVSDTGIGIAPEHHAAVFDDFSQVDSPVQKRLRGTGLGLSLSRQLAVLLGGHV 263
            + +L+F+V DTGIGIA +    +FD FSQ D+ + ++  GTGLGLS+S+QL  L+GG +
Sbjct: 755 QQVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQI 814

Query: 264 EVASELGKGSVFSVTVPVQLPRQEAAPRE 292
            V SE GKGS F  +V   L  Q+A  R+
Sbjct: 815 TVHSEEGKGSTFEFSVVCGL--QDAKMRD 841