Pairwise Alignments

Query, 292 a.a., Putative SigmaB asociated two-component system sensor protein from Variovorax sp. SCN45

Subject, 977 a.a., periplasmic sensor hybrid histidine kinase from Synechococcus elongatus PCC 7942

 Score =  167 bits (423), Expect = 9e-46
 Identities = 96/276 (34%), Positives = 153/276 (55%), Gaps = 9/276 (3%)

Query: 16  LAASRREVDELRAELEETNRGVVALYAELDAQAEQLKKATELKSRFLAYMSHEFRTPISA 75
           L +    V E  A L ETN         L+   EQ + A + KS FLA MSHE RTP++A
Sbjct: 443 LVSLEHRVQERTAALRETND-------RLEQAREQAEAANQAKSAFLANMSHELRTPLNA 495

Query: 76  IRSIARLLSDRV-DGPLTQEQEKQVGFIDGTATELAEMVDDLLDLAKIEAGRVDISPAWF 134
           I   + ++ +   DG   +E       I+     L E+++ +LDL+KIEAGR+++    F
Sbjct: 496 IIGYSEMMMEEAEDGIEVEELLPDFRKINNAGKHLLELINSILDLSKIEAGRMELYLESF 555

Query: 135 EMVDLFSALRGMFRPVLHNPATALIFEEPEGLPKLYTDDRKLSQILRNFISNALKFTPQG 194
            + +L + ++ + +P++      L+ + P  +  +  D  KL Q L N +SNA KFT QG
Sbjct: 556 SLPELINGVKSIIKPLIEKNQNQLLVDCPADIGLMTADVTKLRQTLLNLLSNASKFTHQG 615

Query: 195 EVRVTAMRVGEDSLKFSVSDTGIGIAPEHHAAVFDDFSQVDSPVQKRLRGTGLGLSLSRQ 254
            +++     G D + F V D+GIG++PE    +F+ F+Q D    ++  GTGLGLS+SR 
Sbjct: 616 TIQLQVAAQG-DQVVFKVVDSGIGMSPEQIDRIFEAFAQADDSTTRKFGGTGLGLSISRH 674

Query: 255 LAVLLGGHVEVASELGKGSVFSVTVPVQLPRQEAAP 290
              ++GG + V S LG+GS F++T+P Q+   ++ P
Sbjct: 675 FIEMMGGKITVESVLGEGSTFTITLPRQVQPPQSIP 710