Pairwise Alignments

Query, 292 a.a., Putative SigmaB asociated two-component system sensor protein from Variovorax sp. SCN45

Subject, 858 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  142 bits (357), Expect = 3e-38
 Identities = 91/273 (33%), Positives = 146/273 (53%), Gaps = 22/273 (8%)

Query: 31  EETNRGVV----------ALYAELDAQAEQLKKATELKSRFLAYMSHEFRTPISAIRSIA 80
           ++ +RGVV          A  +EL    E+ + A   KS FLA MSHE RTP + I  + 
Sbjct: 317 DDLSRGVVWTFEDVTERKAAESELRHAREKAEAANRAKSEFLANMSHEIRTPFTGILGVL 376

Query: 81  RLLSDRVDGPLTQEQEKQVGFIDGTATELAEMVDDLLDLAKIEAGRVDISPAWFEMVDLF 140
            LL   +  PL ++QE+ +    G+  +L  +++D+LD++KIEAG++ I P   ++V L 
Sbjct: 377 DLL---LHTPLNEKQERYIRLAYGSTKQLLAILNDILDISKIEAGKLVIHPEEVDLVLLL 433

Query: 141 SALRGMFRPVLHNPATALIFEEPEGL--PKLYTDDRKLSQILRNFISNALKFTPQG---- 194
             L  +             +   +G+  PK++ D  +L QI+ N ++NA+KFT  G    
Sbjct: 434 GELTEVQAAAAAQKGLEFRYHI-KGIIPPKIHGDPVRLRQIMANLLNNAIKFTNSGWVEL 492

Query: 195 EVRVTAMRVGEDSLKFSVSDTGIGIAPEHHAAVFDDFSQVDSPVQKRLRGTGLGLSLSRQ 254
           ++  T +  G   L+  V D+GIG+ PE    +FD F+Q DS   +   GTGLGL++ +Q
Sbjct: 493 DIECTRIAPGRQHLRVEVRDSGIGVPPELQETIFDKFTQADSSTTRLFGGTGLGLTICKQ 552

Query: 255 LAVLLGGHVEVASELGKGSVFSVTVPVQLPRQE 287
           L  L+ G + V+S  G+GS F     ++LP  +
Sbjct: 553 LVELMHGSIGVSSNSGEGSCF--WFDIELPESD 583