Pairwise Alignments

Query, 292 a.a., Putative SigmaB asociated two-component system sensor protein from Variovorax sp. SCN45

Subject, 1236 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  140 bits (354), Expect = 1e-37
 Identities = 97/264 (36%), Positives = 146/264 (55%), Gaps = 31/264 (11%)

Query: 37  VVALYAELDAQAEQLKKATELKSRFLAYMSHEFRTPISAIRSIARLLSDRVDGPLTQEQE 96
           V  L A+ DA+   L      KS FLA MSHE RTP++AI  + +L        LT +Q+
Sbjct: 706 VALLEAKQDAELANL-----YKSEFLANMSHEIRTPMNAIIGMLQLAQRT---SLTAQQK 757

Query: 97  KQVGFIDGTATELAEMVDDLLDLAKIEAGRVDISPAWFEM-------VDLFSALRGMFRP 149
             +     +A  L  +++D+LD +KIEAG++++    F +       +DL +AL+   + 
Sbjct: 758 DYLEKAGFSAQSLLRIINDILDFSKIEAGKLELERVPFPLDKVLDHALDL-NALKAQEQG 816

Query: 150 V---LHNPATALIFEEPEGLPKLYTDDRKLSQILRNFISNALKFTPQGEVRVTAMRVGED 206
           V   L+ P TA +         L  D  +L Q+L N +SNA+KFT  GE+ +    VGE 
Sbjct: 817 VELLLYAPVTAGLI--------LKGDPLRLGQVLINLLSNAVKFTQSGEIELGCEDVGER 868

Query: 207 ----SLKFSVSDTGIGIAPEHHAAVFDDFSQVDSPVQKRLRGTGLGLSLSRQLAVLLGGH 262
               +LKF V DTGIGI+ +    +FD F+Q D    ++  GTGLGLS+S+ L  ++GG 
Sbjct: 869 DHRITLKFWVRDTGIGISKDQQEKLFDAFAQADGSTTRKYGGTGLGLSISKHLVSMMGGK 928

Query: 263 VEVASELGKGSVFSVTVPVQLPRQ 286
           ++V SELG GS FS T+  ++  +
Sbjct: 929 MQVQSELGVGSTFSFTISFEIAEE 952