Pairwise Alignments

Query, 556 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 542 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  435 bits (1119), Expect = e-126
 Identities = 252/533 (47%), Positives = 343/533 (64%), Gaps = 12/533 (2%)

Query: 11  LVSVEGLTLAVGMGGRE--IVRNVSFDIAPGEMVGIVGESGSGKTQAARAIMGLTPPPLV 68
           L+SV  L++A   GG     V  +SFDI  GE V +VGESGSGK+ +A +I+ L P P  
Sbjct: 5   LLSVRDLSVAFHQGGETSLAVDRISFDIKRGETVALVGESGSGKSVSANSILKLLPYPAA 64

Query: 69  -RTAGRILFEGEDLTQAKPARLRELRGARVGMVFQEPMTSLNPSMTIGKQLVEALALHRR 127
              +G ILF G+DL +A    LR +RG  V M+FQEPMTSLNP  TI +Q+ E L +H+ 
Sbjct: 65  SHPSGEILFNGKDLLKASDDELRHVRGNDVTMIFQEPMTSLNPLHTIEQQIGEILEIHQ- 123

Query: 128 DLSPAARRERILDMLARVGIRDPKGALDAWPHEFSGGMRQRMMLASVMLLEPALLIADEP 187
           DL  AA R R L++L +VGIR+ +  L A+PH+ SGG RQR+M+A  +   P LLIADEP
Sbjct: 124 DLKGAAARARTLELLEQVGIREAEKRLGAYPHQLSGGQRQRVMIAMALANRPELLIADEP 183

Query: 188 TTALDAVVQRDVLELMVGLTREHRTAVLMISHDLPMVARFTQRMVVMRHGEVMETGRTDD 247
           TTALD  VQ  +LEL+  L  EH  ++L I+HDL +V +   R+ VM  G+++ETG T +
Sbjct: 184 TTALDVTVQAQILELLKSLKDEHGMSMLFITHDLGIVRKIADRVCVMTKGKIVETGPTAE 243

Query: 248 MLEQPRHAYTRELLQAMPHRLPARQVPDEAPVVEVRNLVVDY---AGHRRLFAKTVPKRA 304
           +   P+HAYTR LL + P   P         V+E +++ V +   AG  R     V  +A
Sbjct: 244 IFANPQHAYTRHLLASEPRGEPPPSDASRPIVIEAKDMKVWFPIKAGFLRRVVDHV--KA 301

Query: 305 LHGIDLVVRPREVVAVVGGSGSGKTTLGRTIAGLLQPSGGEIMFRGRPI-LRSDAGWSDY 363
           + GIDL +R  + + VVG SGSGKTTLG  +  L+  S G I F G  I   S       
Sbjct: 302 VDGIDLTLRAGQTLGVVGESGSGKTTLGLALTRLIS-SKGRIAFVGEDIDAYSFREMRPL 360

Query: 364 RLQCQMVFQDPYASLDPRMTIGQLVGEGLRL-VKGMSTADRARRVQEVLEEVGLGTGFAP 422
           R + Q+VFQDPY SL PRM+I  ++GEGL++  K ++  +R +RV   LEEVGL      
Sbjct: 361 RNRMQVVFQDPYGSLSPRMSIADIIGEGLKIHEKALTDGERDQRVAAALEEVGLDPATRW 420

Query: 423 RYAHELSGGQRQRVAIARAIVRRPAFVIADEPVSALDVTVRAQVLALFAELQKRHGFSCL 482
           RY HE SGGQRQR+AIARA+V +P FV+ DEP SALD++V+AQV+ L  +LQ++H  + L
Sbjct: 421 RYPHEFSGGQRQRIAIARAMVLKPQFVMLDEPTSALDMSVQAQVVDLLRDLQRKHNLAYL 480

Query: 483 FISHDLGVVEQVADRVVVMQDGRIVEQGSRDTVFDAPTQDYTRKLLSAIPALE 535
           FISHDL VV  +A+ V+VM+ G++VEQG  + +F+APT+DYT+ L++A   LE
Sbjct: 481 FISHDLRVVRALANEVIVMRLGKVVEQGPAERIFEAPTEDYTKALMAAAFNLE 533



 Score =  177 bits (449), Expect = 9e-49
 Identities = 110/247 (44%), Positives = 147/247 (59%), Gaps = 19/247 (7%)

Query: 304 ALHGIDLVVRPREVVAVVGGSGSGKTTLGRTIAGLL------QPSGGEIMFRGRPILRSD 357
           A+  I   ++  E VA+VG SGSGK+    +I  LL       PSG EI+F G+ +L++ 
Sbjct: 24  AVDRISFDIKRGETVALVGESGSGKSVSANSILKLLPYPAASHPSG-EILFNGKDLLKA- 81

Query: 358 AGWSDYRLQ------CQMVFQDPYASLDPRMTIGQLVGEGLRLVKGMSTADRARRVQEVL 411
              SD  L+        M+FQ+P  SL+P  TI Q +GE L + + +  A    R  E+L
Sbjct: 82  ---SDDELRHVRGNDVTMIFQEPMTSLNPLHTIEQQIGEILEIHQDLKGAAARARTLELL 138

Query: 412 EEVGLGTGFAP--RYAHELSGGQRQRVAIARAIVRRPAFVIADEPVSALDVTVRAQVLAL 469
           E+VG+         Y H+LSGGQRQRV IA A+  RP  +IADEP +ALDVTV+AQ+L L
Sbjct: 139 EQVGIREAEKRLGAYPHQLSGGQRQRVMIAMALANRPELLIADEPTTALDVTVQAQILEL 198

Query: 470 FAELQKRHGFSCLFISHDLGVVEQVADRVVVMQDGRIVEQGSRDTVFDAPTQDYTRKLLS 529
              L+  HG S LFI+HDLG+V ++ADRV VM  G+IVE G    +F  P   YTR LL+
Sbjct: 199 LKSLKDEHGMSMLFITHDLGIVRKIADRVCVMTKGKIVETGPTAEIFANPQHAYTRHLLA 258

Query: 530 AIPALEP 536
           + P  EP
Sbjct: 259 SEPRGEP 265