Pairwise Alignments

Query, 556 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 556 a.a., ABC transporter for D-Raffinose, ATPase component (from data) from Sinorhizobium meliloti 1021

 Score =  415 bits (1067), Expect = e-120
 Identities = 235/521 (45%), Positives = 330/521 (63%), Gaps = 10/521 (1%)

Query: 17  LTLAVGMGGREIVRNVSFDIAPGEMVGIVGESGSGKTQAARAIMGL-TPPPLVRTAGRIL 75
           ++  V  G  + V++VSF +  GE V IVGESGSGK+  AR +MGL +    +    RI 
Sbjct: 33  VSFKVENGTVQAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMGLLSKRATIAPQARIE 92

Query: 76  FEGEDLTQAKPARLRELRGARVGMVFQEPMTSLNPSMTIGKQLVEALALHRRDLSPAARR 135
           ++G D+ +      R LRG R+ M+FQEPM+SLNP  TIG Q++EA+  HRR +S  A  
Sbjct: 93  YDGRDVLKFSKRERRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRAHRR-VSRRAAA 151

Query: 136 ERILDMLARVGIRDPKGALDAWPHEFSGGMRQRMMLASVMLLEPALLIADEPTTALDAVV 195
           ER L++L  V I DP+  L+ +PH+ SGG RQR+M+A  +  +P +LIADEPTTALD  V
Sbjct: 152 ERALELLRHVQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIADEPTTALDVTV 211

Query: 196 QRDVLELMVGLTREHRTAVLMISHDLPMVARFTQRMVVMRHGEVMETGRTDDMLEQPRHA 255
           Q  +L L+  L +E   AV++I+HDL +V +F+  + VM+ GEV E   T+ +   P+HA
Sbjct: 212 QAQILNLIRKLQQELGMAVILITHDLTVVRQFSDYVYVMQLGEVKEHNTTEALFADPQHA 271

Query: 256 YTRELLQAMPHRLPARQVPDEAPVV-EVRNLVVDYAGHRRLFAKTVPKR--ALHGIDLVV 312
           YTR LL + P    A  +PD+AP++ + RN+ V +   +  F +   K   A+ G+ L +
Sbjct: 272 YTRRLLSSEPSG-SANPLPDDAPILLDGRNVRVSFTLKKGGFFRPEFKELVAVDGLSLNL 330

Query: 313 RPREVVAVVGGSGSGKTTLGRTIAGLLQPSGGEIMFRGRPILRSDA-GWSDYRLQCQMVF 371
           R  E + +VG SGSGKTT G+ +  LL   GGEI F G PI   D  G    R + Q+VF
Sbjct: 331 RRHETLGLVGESGSGKTTFGQALIRLLNTDGGEIYFEGEPIHDKDRKGMRPLRSKIQIVF 390

Query: 372 QDPYASLDPRMTIGQLVGEGLRLVKGM--STADRARRVQEVLEEVGLGTGFAPRYAHELS 429
           QDP++SL+PRM++GQ++ EGL +V GM  +  DR +RV++ L   G+ +    R+ HE S
Sbjct: 391 QDPFSSLNPRMSVGQIIEEGL-IVNGMGENRKDRLKRVEDALVSAGMPSNILSRFPHEFS 449

Query: 430 GGQRQRVAIARAIVRRPAFVIADEPVSALDVTVRAQVLALFAELQKRHGFSCLFISHDLG 489
           GGQRQR+AIARA+   P F++ DEP SALD++V+AQ++ L   LQ   G S L ISHDL 
Sbjct: 450 GGQRQRIAIARAVALEPEFILLDEPTSALDLSVQAQIIELLRRLQDERGLSYLVISHDLK 509

Query: 490 VVEQVADRVVVMQDGRIVEQGSRDTVFDAPTQDYTRKLLSA 530
           VV  +  RVVVMQDG+IVE+G    V + P   YT +L+ A
Sbjct: 510 VVRALCHRVVVMQDGKIVEEGPVSEVLNNPKTAYTERLVKA 550



 Score =  162 bits (411), Expect = 2e-44
 Identities = 106/288 (36%), Positives = 155/288 (53%), Gaps = 19/288 (6%)

Query: 257 TRELLQAMPHRLPARQVPDEAPVVEVRNLVVDYAGHRRLFAKTVPKRALHGIDLVVRPRE 316
           T E +   P     R + DE PV++ R + V +        +    +A+  +   +   E
Sbjct: 3   TIESIVPAPEERRDRDMKDERPVIDARKVAVSFK------VENGTVQAVKDVSFQLYRGE 56

Query: 317 VVAVVGGSGSGKTTLGRTIAGLLQPSG-----GEIMFRGRPILRSDAGWSDYRL----QC 367
            VA+VG SGSGK+   RT+ GLL           I + GR +L+      + R     + 
Sbjct: 57  TVAIVGESGSGKSVTARTVMGLLSKRATIAPQARIEYDGRDVLKFSK--RERRALRGDRI 114

Query: 368 QMVFQDPYASLDPRMTIGQLVGEGLRLVKGMSTADRARRVQEVLEEVGLGTGFAP--RYA 425
            M+FQ+P +SL+P  TIG  + E +R  + +S    A R  E+L  V +    A   +Y 
Sbjct: 115 SMIFQEPMSSLNPVYTIGSQIIEAIRAHRRVSRRAAAERALELLRHVQIPDPEARLNQYP 174

Query: 426 HELSGGQRQRVAIARAIVRRPAFVIADEPVSALDVTVRAQVLALFAELQKRHGFSCLFIS 485
           H+LSGGQRQRV IA A+   P  +IADEP +ALDVTV+AQ+L L  +LQ+  G + + I+
Sbjct: 175 HQLSGGQRQRVMIAMALANDPDVLIADEPTTALDVTVQAQILNLIRKLQQELGMAVILIT 234

Query: 486 HDLGVVEQVADRVVVMQDGRIVEQGSRDTVFDAPTQDYTRKLLSAIPA 533
           HDL VV Q +D V VMQ G + E  + + +F  P   YTR+LLS+ P+
Sbjct: 235 HDLTVVRQFSDYVYVMQLGEVKEHNTTEALFADPQHAYTRRLLSSEPS 282