Pairwise Alignments

Query, 556 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 533 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  432 bits (1111), Expect = e-125
 Identities = 241/511 (47%), Positives = 329/511 (64%), Gaps = 8/511 (1%)

Query: 24  GGREIVRNVSFDIAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVRTAGRILFEGEDLTQ 83
           G  E V+ +  D+  GE + +VGESGSGK+Q    IMGL       T G   + G++L  
Sbjct: 23  GTVEAVKGIDLDVRSGETLAVVGESGSGKSQTMMGIMGLLAKNGTVT-GSARYRGQELVG 81

Query: 84  AKPARLRELRGARVGMVFQEPMTSLNPSMTIGKQLVEALALHRRDLSPAARRERILDMLA 143
             P  L ++RG+++ M+FQEPMTSL+P  TIG+Q+ E +  HR      ARR R+L++L 
Sbjct: 82  LAPKALNKVRGSKITMIFQEPMTSLDPLYTIGRQIAEPIVHHRGGSFKEARR-RVLELLE 140

Query: 144 RVGIRDPKGALDAWPHEFSGGMRQRMMLASVMLLEPALLIADEPTTALDAVVQRDVLELM 203
            VGI +P   +D++PHE SGG RQR+M+A  +  EP +LIADEPTTALD  +Q  +L+L+
Sbjct: 141 LVGIPEPGRRIDSYPHELSGGQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLL 200

Query: 204 VGLTREHRTAVLMISHDLPMVARFTQRMVVMRHGEVMETGRTDDMLEQPRHAYTRELLQA 263
             L R    A+++I+HDL +V  F  R+ VMR GEV+E G T D+ E+P+  YTR LL+A
Sbjct: 201 KSLQRRFGMAIVLITHDLGIVKYFADRVAVMRRGEVVEQGMTADIFERPKGDYTRMLLEA 260

Query: 264 MPHRLPARQVPDEAPVV-EVRNLVVDYAGHRRLF-AKTVPKRALHGIDLVVRPREVVAVV 321
            P    A   PD AP++ E RN+ VDY     LF   +   RA+ G++L +R  + + +V
Sbjct: 261 EPSGRKASP-PDNAPIILEGRNVAVDYTIPGGLFRGASAAFRAVDGVNLRLRQGQTIGIV 319

Query: 322 GGSGSGKTTLGRTIAGLLQPSGGEIMFRGRPILRSDAG-WSDYRLQCQMVFQDPYASLDP 380
           G SGSGK+TLGR +  LL PS G   F    I   D G     R Q Q+VFQDPY SL P
Sbjct: 320 GESGSGKSTLGRALLRLL-PSSGYYRFGSTDISGFDRGAMRPLRRQLQLVFQDPYGSLSP 378

Query: 381 RMTIGQLVGEGLRLVK-GMSTADRARRVQEVLEEVGLGTGFAPRYAHELSGGQRQRVAIA 439
           R T+G+++ EGL + +  +S ADR RR    L+EVGL      RY HE SGGQRQR+AIA
Sbjct: 379 RRTVGEIITEGLHVHEPDLSRADRDRRAIAALKEVGLDPASRNRYPHEFSGGQRQRIAIA 438

Query: 440 RAIVRRPAFVIADEPVSALDVTVRAQVLALFAELQKRHGFSCLFISHDLGVVEQVADRVV 499
           RAI+ +P  VI DEP SALD +V+ QV+ L  +LQ++HG S +FISHDL VV+ ++D V+
Sbjct: 439 RAIILKPKVVILDEPTSALDRSVQGQVIELLRDLQEKHGLSYIFISHDLSVVKAMSDYVI 498

Query: 500 VMQDGRIVEQGSRDTVFDAPTQDYTRKLLSA 530
           VM++GRIVE+G  D +FDAP + YT+ L+ A
Sbjct: 499 VMKNGRIVEEGETDAIFDAPREPYTKTLIGA 529



 Score =  182 bits (463), Expect = 2e-50
 Identities = 115/262 (43%), Positives = 153/262 (58%), Gaps = 13/262 (4%)

Query: 279 VVEVRNLVVDYAGHRRLFAKTVPKRALHGIDLVVRPREVVAVVGGSGSGKTTLGRTIAGL 338
           ++ VR L VD+      +       A+ GIDL VR  E +AVVG SGSGK+     I GL
Sbjct: 8   ILAVRGLKVDF------YTPDGTVEAVKGIDLDVRSGETLAVVGESGSGKSQTMMGIMGL 61

Query: 339 LQPSG---GEIMFRGRPI--LRSDAGWSDYRLQCQMVFQDPYASLDPRMTIGQLVGEGLR 393
           L  +G   G   +RG+ +  L   A       +  M+FQ+P  SLDP  TIG+ + E + 
Sbjct: 62  LAKNGTVTGSARYRGQELVGLAPKALNKVRGSKITMIFQEPMTSLDPLYTIGRQIAEPIV 121

Query: 394 LVKGMSTADRARRVQEVLEEVGLGTGFA--PRYAHELSGGQRQRVAIARAIVRRPAFVIA 451
             +G S  +  RRV E+LE VG+         Y HELSGGQRQRV IA A+   P  +IA
Sbjct: 122 HHRGGSFKEARRRVLELLELVGIPEPGRRIDSYPHELSGGQRQRVMIAMALANEPDILIA 181

Query: 452 DEPVSALDVTVRAQVLALFAELQKRHGFSCLFISHDLGVVEQVADRVVVMQDGRIVEQGS 511
           DEP +ALDVT++AQ+L L   LQ+R G + + I+HDLG+V+  ADRV VM+ G +VEQG 
Sbjct: 182 DEPTTALDVTIQAQILDLLKSLQRRFGMAIVLITHDLGIVKYFADRVAVMRRGEVVEQGM 241

Query: 512 RDTVFDAPTQDYTRKLLSAIPA 533
              +F+ P  DYTR LL A P+
Sbjct: 242 TADIFERPKGDYTRMLLEAEPS 263