Pairwise Alignments

Query, 556 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  417 bits (1072), Expect = e-121
 Identities = 236/535 (44%), Positives = 331/535 (61%), Gaps = 12/535 (2%)

Query: 8   GTPLVSVEGLTLA-VGMGGR-EIVRNVSFDIAPGEMVGIVGESGSGKTQAARAIMGL--T 63
           G  L+ V+ LT+  + +GG       VSF +  GE + I+GESGSGK+ +A AIMGL  T
Sbjct: 3   GPHLLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDT 62

Query: 64  PPPLVRTAGRILFEGEDLTQAKPARLRELRGARVGMVFQEPMTSLNPSMTIGKQLVEALA 123
           PP  +  AG + + G DL+       R+L G R+ M+FQ+P++ LNP  TIG QL E   
Sbjct: 63  PPGDI-CAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFT 121

Query: 124 LHRRDLSPAARRERILDMLARVGIRDPKGALDAWPHEFSGGMRQRMMLASVMLLEPALLI 183
           +H    S A  R+R +++L RVGI +P+  +D +PH+FSGG RQR+M+   + L P +LI
Sbjct: 122 VHGV-ASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILI 180

Query: 184 ADEPTTALDAVVQRDVLELMVGLTREHRTAVLMISHDLPMVARFTQRMVVMRHGEVMETG 243
           ADEPTTALD  VQ  +LEL+  L  E   A++MI+HDL + A    R++VM+ G ++E G
Sbjct: 181 ADEPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEG 240

Query: 244 RTDDMLEQPRHAYTRELLQAMPH---RLPARQV-PDEAPVVEVRNLVVDYAGHRRLFAKT 299
               + E P H+YTR L+ A+PH   R P R   P   P++EV+N+   Y      FAK 
Sbjct: 241 EARAVFENPAHSYTRTLINALPHADDRAPPRPARPAGKPILEVKNIDKFYTLSSGFFAKP 300

Query: 300 VPKRALHGIDLVVRPREVVAVVGGSGSGKTTLGRTIAGLLQPSGGEIMFRGRPILRSD-A 358
               A+  +   V   E + +VG SGSGK+T+ R + GL + SGGE +F GR +L+ D  
Sbjct: 301 ARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEASGGEALFHGRDVLKMDRK 360

Query: 359 GWSDYRLQCQMVFQDPYASLDPRMTIGQLVGEGLRLVKGMSTADRAR-RVQEVLEEVGLG 417
               +R + QMVFQDPY+S++PRMT+  +V E  R+ K +    R R RV E+L  VGL 
Sbjct: 361 QLLAFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVGLN 420

Query: 418 TGFAPRYAHELSGGQRQRVAIARAIVRRPAFVIADEPVSALDVTVRAQVLALFAELQKRH 477
              A RY H+ SGGQRQR+AIARA+   P  V+ DE VSALDV+V+ QV+ L AEL+ R 
Sbjct: 421 PEHAKRYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLLAELRDRL 480

Query: 478 GFSCLFISHDLGVVEQVADRVVVMQDGRIVEQGSRDTVFDAPTQDYTRKLLSAIP 532
           G + +FI+HDL +V   ADR++VM+ G IVE  + + +F  P   YTR+L++A P
Sbjct: 481 GLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLINATP 535



 Score =  164 bits (414), Expect = 1e-44
 Identities = 104/269 (38%), Positives = 150/269 (55%), Gaps = 15/269 (5%)

Query: 279 VVEVRNLVVDYAGHRRLFAKTVPKRALHGIDLVVRPREVVAVVGGSGSGKTTLGRTIAGL 338
           ++EV++L VD+      F      RA  G+   V   E + ++G SGSGK+     I GL
Sbjct: 6   LLEVKDLTVDFLSLGGAF------RATSGVSFHVDAGETLVILGESGSGKSVSASAIMGL 59

Query: 339 LQ-PSG----GEIMFRGRPILR-SDAGWSDYR-LQCQMVFQDPYASLDPRMTIGQLVGEG 391
           +  P G    G + +RGR +   S+    D    +  M+FQDP + L+P  TIG  + E 
Sbjct: 60  IDTPPGDICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEV 119

Query: 392 LRLVKGMSTADRARRVQEVLEEVGLGTGFA--PRYAHELSGGQRQRVAIARAIVRRPAFV 449
             +    S A+  +R  E+L  VG+        +Y H+ SGGQRQR+ I  AI  RP  +
Sbjct: 120 FTVHGVASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEIL 179

Query: 450 IADEPVSALDVTVRAQVLALFAELQKRHGFSCLFISHDLGVVEQVADRVVVMQDGRIVEQ 509
           IADEP +ALDV+V+AQ+L L  +LQ   G + + I+HDL V   +ADRV+VM+ GRIVE+
Sbjct: 180 IADEPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEE 239

Query: 510 GSRDTVFDAPTQDYTRKLLSAIPALEPTA 538
           G    VF+ P   YTR L++A+P  +  A
Sbjct: 240 GEARAVFENPAHSYTRTLINALPHADDRA 268