Pairwise Alignments

Query, 278 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 300 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  171 bits (432), Expect = 2e-47
 Identities = 94/263 (35%), Positives = 152/263 (57%), Gaps = 6/263 (2%)

Query: 16  IGIVIVGLIVAAALVSLVWTPHDPLRINFGARLKLP------GGAFLLGTDEFGRDELSR 69
           IG V++ +I A AL +    P+DP   +   R+K P         ++LGTD+ GRD LSR
Sbjct: 34  IGAVLLLIIFAGALFAPWLAPYDPYAQDVMLRMKPPVWMANGTWEYVLGTDKLGRDYLSR 93

Query: 70  LMAGAATSVWIAVLTVGFSIVVGSIVGVLTGFLRGWTDRIVMAFNNALLAFPGLLLALGL 129
           L+ GA  S++I +     S  +G+++G+L G+  G  D  +       LA P +++AL  
Sbjct: 94  LLYGARISLFIGIAAALISGFIGTVMGLLAGYYGGKVDAFISYLITTRLAMPVVMVALAS 153

Query: 130 LAVVGANQYGIVLALGLAYTPSVTRIVRGTVLSLREKEFIESSRVLGNSELYTMVRHVLP 189
            +++G +   +++ LG         +VR +V  +R+ E++ S++ LG S L  +V  +LP
Sbjct: 154 ASLMGGSLKVVIVLLGCLLWDRFAVVVRASVQQIRDAEYVASAQALGCSTLRILVSEILP 213

Query: 190 NCTAPLTVLATSMFGWVILAESALSFLGLGVPPPAPTWGNMLASARPFMAQASYLSILPG 249
           N    L V+AT      IL ESALSFLG+GV PP P+WG M+A  +P+M  + ++  +PG
Sbjct: 214 NLVGALIVVATLEMAHAILLESALSFLGVGVQPPTPSWGLMIAEGKPYMFFSPWVIAIPG 273

Query: 250 LCIALTLLGINLLGDAVRDWLDP 272
           + + + +LGINL+GD +RD + P
Sbjct: 274 VALMILVLGINLVGDGLRDLILP 296