Pairwise Alignments

Query, 278 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 303 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  189 bits (481), Expect = 5e-53
 Identities = 111/268 (41%), Positives = 159/268 (59%), Gaps = 6/268 (2%)

Query: 14  ALIGIVIVGLIVAAALVSLVWTPHDPLRINFGARLKLP----GGA--FLLGTDEFGRDEL 67
           A+ G++ + LIV  AL +    PHDP        L  P    GG   F+LGTDE GRD L
Sbjct: 33  AVAGLLFMILIVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGGQWQFILGTDELGRDLL 92

Query: 68  SRLMAGAATSVWIAVLTVGFSIVVGSIVGVLTGFLRGWTDRIVMAFNNALLAFPGLLLAL 127
           SRL+ G+  S+ I + +V  S++ G ++G+L GF        VM   + +LA P LLLA+
Sbjct: 93  SRLIQGSRLSLLIGLASVVMSLIPGILLGLLAGFFPRVLGPSVMRLMDIMLALPSLLLAV 152

Query: 128 GLLAVVGANQYGIVLALGLAYTPSVTRIVRGTVLSLREKEFIESSRVLGNSELYTMVRHV 187
            ++A++G      V+A+ +   PS  R+ R  V+    ++++ ++R+ G +    M   V
Sbjct: 153 AIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGATLPRLMFITV 212

Query: 188 LPNCTAPLTVLATSMFGWVILAESALSFLGLGVPPPAPTWGNMLASARPFMAQASYLSIL 247
           LPNC APL V AT  F   IL  +AL FLGLGV PP P WG MLASAR ++ +A ++  L
Sbjct: 213 LPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSL 272

Query: 248 PGLCIALTLLGINLLGDAVRDWLDPRMK 275
           PGL I L++L INL+GD +RD LDP++K
Sbjct: 273 PGLTILLSVLAINLMGDGLRDALDPKLK 300