Pairwise Alignments

Query, 314 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 314 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  256 bits (655), Expect = 4e-73
 Identities = 130/311 (41%), Positives = 199/311 (63%)

Query: 1   MFRFAASRIAMAIPTLLIVAVSVFVLIRLIPGDPAQLLLGDLATPASLAELRARLGLDRS 60
           M  F   R+  +IPTL++V++ VF L +L+PGDP   + G+   PA +  LR +  LD  
Sbjct: 1   MLMFILRRLLSSIPTLILVSLFVFTLQKLLPGDPVLAMAGEERDPAVMEYLRDKYRLDDP 60

Query: 61  VPAQFGIWFGHVLQGDLGTSINSGQDVLSLVTERFLISGRIVLVAVALAAMVAVPAGMIA 120
           +P Q+  W G+VL GDLGTS+ + Q V +L+  +  ++  + ++A+ +A ++ +P G+I+
Sbjct: 61  IPLQYLNWVGNVLTGDLGTSLRTEQAVTTLLASKLPVTIELAVLALLIALLIGIPTGIIS 120

Query: 121 AWKQNRAPDLLLVGAATLLVSIPTFWLGLLLLLLFGLKLGWLPVVGYVGISEDWKNGLLY 180
           A ++  A D      A   +SIP FWLG+LL+++F +KL WLP  G+V + ED+   L  
Sbjct: 121 AVRKGTAVDYGANVVALSGISIPHFWLGILLIMVFAVKLQWLPASGFVPMGEDFGQNLKT 180

Query: 181 LLLPVLTLFLHEIGVLMRMARASTLEVLRLDYITHARAKGLSERAVLMRHAFKNAFGPTW 240
           L+LP   L     G+LMR  R++ LEVLR DY+  ARAKGL  R V+++HA +NA  P  
Sbjct: 181 LILPAFVLGAGLSGILMRHTRSAMLEVLRTDYVRTARAKGLFPRTVILKHALRNALMPIV 240

Query: 241 TLIGLVLGNLLGGIAVVETVFTIPGLGRLLVDAIFARDYPVIQGCLLFVAVIYVAVNLVI 300
           TL  L+ G LLGG  + E VF+IPG G+++VDA+F RDY V+QG +L VA+ ++ +NL+ 
Sbjct: 241 TLTTLLFGELLGGAVLTEQVFSIPGFGKMIVDAVFNRDYAVVQGVVLCVAIGFLMLNLLA 300

Query: 301 DLCYPFFDPRV 311
           D+ Y   +PR+
Sbjct: 301 DVLYRLINPRL 311