Pairwise Alignments

Query, 314 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  211 bits (538), Expect = 1e-59
 Identities = 116/317 (36%), Positives = 183/317 (57%), Gaps = 9/317 (2%)

Query: 1   MFRFAASRIAMAIPTLLIVAVSVFVLIRLIPGDPAQLLLGD---LATPASLAELRARLGL 57
           M RF   R+   IPT+++VA+ +FV+  ++PG  A  L  D    A P  +A L    GL
Sbjct: 1   MLRFTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFADGRRAADPQMIARLNEEFGL 60

Query: 58  DRSVPAQFGIWFGHVLQGDLGTSINSGQDVLSLVTERFLISGRIVLVAVALAAMVAVPAG 117
           ++ +  +F  +   + Q DLGTS  + Q V+ L+ +R   S ++ + A+  A +++VP G
Sbjct: 61  NKPLMERFVTYVTDLAQFDLGTSFRTRQPVIDLINDRMWASLQLAIAAMIFALVISVPLG 120

Query: 118 MIAAWKQNRAPDLLLVGAATLLVSIPTFWLGLLLLLLFGLKLGWLPVVGYVGISEDWKNG 177
            +AA +     D + +  A   +S+P FWLGLL++ LF L+L WLP  GY   S  ++N 
Sbjct: 121 FVAALRPGSVLDTVTMIGAVSGLSMPQFWLGLLMMYLFALQLNWLPSFGYGDGS--FRN- 177

Query: 178 LLYLLLPVLTLFLHEIGVLMRMARASTLEVLRLDYITHARAKGLSERAVLMRHAFKNAFG 237
              L+LP +TL +  + +L R  RA  L+VL  D+I  A +KG+SE  V+  H  +NA  
Sbjct: 178 ---LILPAVTLGVTPLALLARTTRAGVLDVLNADFIRTAHSKGMSEAKVVRWHVARNALV 234

Query: 238 PTWTLIGLVLGNLLGGIAVVETVFTIPGLGRLLVDAIFARDYPVIQGCLLFVAVIYVAVN 297
              T +GL  G+L+G   V+E +F  PG+G LLVD++ +RD PV+QG +L + + ++ +N
Sbjct: 235 LIVTTVGLQFGSLIGQAVVIEKLFAWPGIGSLLVDSVASRDIPVVQGTILVIVLWFLVIN 294

Query: 298 LVIDLCYPFFDPRVAVE 314
             +DL Y   DPR+  E
Sbjct: 295 TAVDLIYAAIDPRIKQE 311