Pairwise Alignments

Query, 333 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

Subject, 325 a.a., C4-dicarboxylate transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  107 bits (266), Expect = 5e-28
 Identities = 66/237 (27%), Positives = 116/237 (48%), Gaps = 3/237 (1%)

Query: 24  QERVIRFGHLN-NADHPVSFGVKRFAELLAAKSGGKMKVQEYPASQLGNEMQQQSALQGG 82
           QE  +RF     N + P+   +K +AE +  +SGG++ +      QLG + +    +  G
Sbjct: 22  QEYSLRFSTSQVNPNEPIIKAMKTYAERVGERSGGRIAITVMTGDQLGAQKKVNEMVMSG 81

Query: 83  VQQMSAPATTSLAGIVKEFGLVDFPFSVNNFAQADALLDGPLGQALIAKLPEKGL-VALG 141
              +SA     L   V +  ++  P+   + A  D L    L + L  KL  +G+ + + 
Sbjct: 82  ASLLSATDYGQLGQFVPDLSILAGPYVYPDLAATDRLFASDLYKDLSGKLEARGIKIIMP 141

Query: 142 YWDLGFRNVTNSKRPIAKPEDLEGLKIRVIPNPVFLETFKSFKANPVPMPFAELYGALES 201
               G+R++  +K P+  P DL G+ IRV  +P+ + TF ++ A P  +P+ ++Y AL++
Sbjct: 142 NGLFGYRHIIANK-PVRSPADLAGVTIRVPSSPIMMATFGNYGARPTELPWGDVYNALQT 200

Query: 202 KAVDGQENPYSVILSNKFFEVQKFVSATNHVYAANIVLVSKKFWDSLSAAEQKMMNE 258
             VD  E P+  I   K  E +K +S T H       + S +F++SL    Q ++ E
Sbjct: 201 GVVDAAEGPFGSIAGAKLNETRKVISKTGHQIMFTAWVASSQFFNSLPEDLQTILLE 257