Pairwise Alignments

Query, 333 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

Subject, 331 a.a., TRAP-type large permease component from Sinorhizobium meliloti 1021

 Score =  114 bits (285), Expect = 3e-30
 Identities = 73/294 (24%), Positives = 134/294 (45%), Gaps = 4/294 (1%)

Query: 10  AGLCIGLVAPTW--AQQERVIRFGHLNNADHPVSFGVKRFAELLAAKSGGKMKVQEYPAS 67
           AG  + L  P+   AQ+ R +R G +    HP +    +  E L A++ G++ +  +PA 
Sbjct: 14  AGAALSLATPSLVRAQETRTLRLGIVTPPGHPWNNAALKVGEALKAETNGRLSISVFPAG 73

Query: 68  QLGNEMQQQSALQGGVQQMSAPATTSLAGIVKEFGLVDFPFSVNNFAQADALLDGPLGQA 127
           QLGNE      +Q G   +    T  L   +     ++ P+ V++ A+   L+  P+   
Sbjct: 74  QLGNEAAMLQQMQSGALDLGWIMTAELGSRIPAVAAINAPWVVDSTAKVAKLVREPVAMK 133

Query: 128 LIAKLP-EKGLVALGYWDLGFRNVTNSKRPIAKPEDLEGLKIRVIPNPVFLETFKSFKAN 186
           L+  LP E G V L  W +    V  S + IA  +D+ G+K+R+   P + + ++   A 
Sbjct: 134 LLDVLPAETGTVGLA-WGITTMRVVFSAKEIAGLDDINGMKLRINTTPAYRDFYQLLGAA 192

Query: 187 PVPMPFAELYGALESKAVDGQENPYSVILSNKFFEVQKFVSATNHVYAANIVLVSKKFWD 246
           P P+P   ++ A+ +  VDG E       + +F +V K +   N ++   + L S + W 
Sbjct: 193 PTPIPTPAVFDAMSNGQVDGLEADLDFSWNQRFDKVSKTMLKMNAIFMPCVALASGRVWQ 252

Query: 247 SLSAAEQKMMNEAADEARGYQRQVSRAAAQKAIGDLQAKGAQFNEVSAAEQVRM 300
           +L  A+++++      A   Q   + A     +      G    +V+ A+  R+
Sbjct: 253 TLPEADREIIARLTKSALDEQIDATVANEPALLEKFAGAGIPIKDVTVADAGRI 306