Pairwise Alignments

Query, 333 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

Subject, 323 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  139 bits (350), Expect = 1e-37
 Identities = 93/321 (28%), Positives = 155/321 (48%), Gaps = 7/321 (2%)

Query: 6   TLAVAGLCIGLVAPTWAQQERVIRFGHLNNADHPVSFGVKRFAELLAAKSGGKMKVQEYP 65
           +LA+AGL   + +   AQ+ R +R G    A  P   GV   A ++  KSGG++ ++ +P
Sbjct: 7   SLALAGLL--MASQAMAQEARTLRLGMQGTAGDPQFEGVTEAARIIKEKSGGRLTLEIFP 64

Query: 66  ASQLGNEMQQQSALQGGVQQMSAPATTSLAGIVKEFGLVDFPFSVNNFAQADALLDGPLG 125
            SQLG   +    +  G    +      +   V    L    + V +F     ++    G
Sbjct: 65  NSQLGTFTEMMEQVTLGELDFTLNPFGGMDAWVPRAVLASTAYVVGDFDHLQKIIASDWG 124

Query: 126 QALIAKL-PEKGLVALGYWDLGFRNVTNSKRPIAKPEDLEGLKIRVIPNPVFLETFKSFK 184
           + ++ ++  E     +  W  G R+ T +K+PI KP D  G+K+RV  +   L   K+  
Sbjct: 125 KGIVDEMRTEHKWRMVDSWYFGTRHTT-AKKPIEKPADFAGMKLRVPNSAPLLTWAKAMG 183

Query: 185 ANPVPMPFAELYGALESKAVDGQENPYSVILSNKFFEVQKFVSATNHVYAANIVLVSKKF 244
           A+P P+ FAE+Y AL++  VDGQENP  +I S KF EVQ  VS T H+    ++L+S+  
Sbjct: 184 ASPTPVAFAEVYLALQTNQVDGQENPLPIIDSMKFTEVQSHVSLTGHLVQDQVILMSEDT 243

Query: 245 WDSLSAAEQKMMNEAADEARGYQRQVSRAAAQKAIGDLQAKGAQFNEVSAAEQVRMREIA 304
           W++L  A+QK++ EA +       ++        + D + +G     V   ++   +E  
Sbjct: 244 WNALEPADQKVVMEAFEAGGALNDKLVSDKEANLVSDFRERGI---TVVEPDKAAFQEAM 300

Query: 305 KPAIDKFASQYDAGIVKLYND 325
           KP      +++ A  VK   D
Sbjct: 301 KPVYADLDAKFGADTVKTLLD 321