Pairwise Alignments

Query, 333 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

Subject, 338 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  283 bits (725), Expect = 3e-81
 Identities = 147/333 (44%), Positives = 218/333 (65%), Gaps = 2/333 (0%)

Query: 2   KLLRTLAVAGLCIGLVAPTWAQ-QERVIRFGHLNNADHPVSFGVKRFAELLAAKSGGKMK 60
           KL   LAV  L +    P  A+ +++ ++F   NN  HP   G+++FAEL+  KSGGK++
Sbjct: 7   KLTLGLAVP-LALMTAGPALAEIRDQTVKFASANNKGHPQVTGMEKFAELVKEKSGGKIE 65

Query: 61  VQEYPASQLGNEMQQQSALQGGVQQMSAPATTSLAGIVKEFGLVDFPFSVNNFAQADALL 120
           V+ +P   LG ++Q  SALQGGV +M+      LA  VKEFG VD PF  ++  +AD ++
Sbjct: 66  VKLFPGGTLGGDVQTVSALQGGVIEMTVLNAGILASNVKEFGAVDLPFLFDSGEEADKVM 125

Query: 121 DGPLGQALIAKLPEKGLVALGYWDLGFRNVTNSKRPIAKPEDLEGLKIRVIPNPVFLETF 180
           DGP G +L+ +LP  GLV + YW+LGFRN+TN++ P+ K ED++GLKIR I +P+ +E F
Sbjct: 126 DGPFGTSLMERLPATGLVGVAYWELGFRNLTNNRHPVTKLEDIKGLKIRTIQSPIPVELF 185

Query: 181 KSFKANPVPMPFAELYGALESKAVDGQENPYSVILSNKFFEVQKFVSATNHVYAANIVLV 240
            +  AN VP+P+ ELY ALE+  VDGQENP + I++ KF+EVQK+++ T H Y   IVLV
Sbjct: 186 NALGANAVPLPYTELYTALETGTVDGQENPSANIINAKFYEVQKYMTLTRHQYNPQIVLV 245

Query: 241 SKKFWDSLSAAEQKMMNEAADEARGYQRQVSRAAAQKAIGDLQAKGAQFNEVSAAEQVRM 300
           SKKFWD L+  E+ ++ +AA EAR +QR+VSR     A+ +++  G + +E+SA E  ++
Sbjct: 246 SKKFWDGLNDEEKTVLQQAAVEARDFQRKVSREQDAAALEEIRKTGMEVSELSAEETQKL 305

Query: 301 REIAKPAIDKFASQYDAGIVKLYNDELARIRKQ 333
           R+  KP I+KF++      V+    E+   R Q
Sbjct: 306 RDAVKPMIEKFSADIGQETVEALFKEIGTARGQ 338