Pairwise Alignments

Query, 187 a.a., TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter from Variovorax sp. SCN45

Subject, 177 a.a., TRAP-type small permease component from Sinorhizobium meliloti 1021

 Score =  130 bits (327), Expect = 1e-35
 Identities = 69/161 (42%), Positives = 105/161 (65%), Gaps = 2/161 (1%)

Query: 1   MNQWIDRCCAGIEALIAAALAVMVVLVFGNVVLRYGFNSGITVSEEVSRWLFIWMTFLGA 60
           M + ID     +E L+   LA M V+VF NVVLRYGFNSGI VS+E+SR+ F+W+TF+GA
Sbjct: 1   MQKAIDTFYKLLELLLIVLLAGMAVMVFLNVVLRYGFNSGINVSDEMSRYFFVWLTFIGA 60

Query: 61  VVALKEHGHLGVDMVVQKLPPVGKKICLATGHVVMLYIVWLLFQGSMAQARINWDVTAPV 120
           VV  +E+ H+GV+ +V      G+ IC+   ++V++ +  + F G+  Q+ IN  + APV
Sbjct: 61  VVTFRENSHVGVETLVSLFGRKGRIICMILSNIVVIAVSAIFFWGTWKQSPINASMAAPV 120

Query: 121 TGASMAIVYASGVVFSVLAAFILGLD-LLRLLTGRIADDDL 160
           TG SM  VY  G  F+     ++ L+ L+RLLTGR+ ++++
Sbjct: 121 TGISMLWVYGIG-YFTGAGVVLIALERLVRLLTGRVTEEEI 160