Pairwise Alignments

Query, 426 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

Subject, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  182 bits (461), Expect = 2e-50
 Identities = 119/426 (27%), Positives = 215/426 (50%), Gaps = 22/426 (5%)

Query: 3   ILVFVGSLLVAMAMGIPIAFSLLACGVALMWHLDLFDAQILA---QNVIGGADSFPLLAV 59
           ++ FV   L A+ +G P+AF+    G+AL++ L     ++ A     +    ++  L+AV
Sbjct: 5   VMFFVA--LFALLLGFPVAFTF--GGIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAV 60

Query: 60  PFFMLAGEIMNVGGLSKRIVDLALALVGHVKGGLGYVTIMAGCLLSALSGSAVADAAALT 119
           P F+  G ++    L++++++    L G + GG+   T++ G LL+A +G   A   A+ 
Sbjct: 61  PLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMG 120

Query: 120 ALLLPMMVKAGHDKARAGGLIAATGIIGPVIPPSIGLVIFGVAANVSISKLFMAAIVPGL 179
            + LP+M+K  +DK  A G I A+G +G +IPPSI L++ G    V +  LF AA+ PGL
Sbjct: 121 LISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPGL 180

Query: 180 LIGGALWVTWAWLVRHEKIQPPPRKP---------AREVMKAARDAGWALLLPVIILVGL 230
           ++  A  +   +++ + K+ P    P          +EV+KA +     L L V++L  +
Sbjct: 181 MLVAAYII---YILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSI 237

Query: 231 RMGVFTPTEAAVVAAVYAFFVATFIYRELSFDALYKVFVSAAKTSAVVMFLIAAAMVSAW 290
             GV TPTE+A +    A  +A   Y + S+  +Y       K +A+V  ++  A   + 
Sbjct: 238 FAGVATPTESAALGGAGAILLA-LAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSM 296

Query: 291 LITVADLPSKVVGLLEPFMGNKILLMIMVMLLVMAVGTAMDMTPTILILTPVLMPVVIAA 350
             T       V   +    G+K   +I+ ML+++ +G  +D      I+ P+L PV +  
Sbjct: 297 AFTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLM 356

Query: 351 GIDPVYFGVMFIINNSIGLITPPVGVVLNVVAGVGKMKMD--DVTRGVLPFMAAEFAIMF 408
            +D  +F ++  +N     +TPP G  L  + GV    +   D+ RGV+PF+  +  ++ 
Sbjct: 357 DVDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLI 416

Query: 409 VMVIFP 414
            +++FP
Sbjct: 417 SLMVFP 422