Pairwise Alignments

Query, 426 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

Subject, 468 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  273 bits (698), Expect = 8e-78
 Identities = 155/457 (33%), Positives = 249/457 (54%), Gaps = 42/457 (9%)

Query: 3   ILVFVGSLLVAMAMGIPIAFSLLACGVALMWHLDLFDAQILAQNVIGGADSFPLLAVPFF 62
           +L+ VGS LV M +G+P+A S+ A  V  +   ++    I AQ +I G +SFPLLAVPFF
Sbjct: 1   MLLLVGSFLVLMLVGVPVAISMAAASVLYLVSYNVAPDIIAAQRMIAGVESFPLLAVPFF 60

Query: 63  MLAGEIMNVGGLSKRIVDLALALVGHVKGGLGYVTIMAGCLLSALSGSAVADAAALTALL 122
           +LAG +MN  G++ RI   A+ALVG +KGGL  V I+   + S +SG+A+ADAA +  + 
Sbjct: 61  ILAGNLMNSAGVTGRIYSFAVALVGWMKGGLAQVNIVGSVIFSGMSGTALADAAGIGTIE 120

Query: 123 LPMMVKAGHDKARAGGLIAATGIIGPVIPPSIGLVIFGVAANVSISKLFMAAIVPGLLIG 182
           +  M   G+    A G+ AA+  +GP+ PPS+  VI+G+ ANVSI  LFMA +VPG+++ 
Sbjct: 121 IKAMKDHGYPVDAAVGVTAASATLGPIFPPSLPFVIYGMMANVSIGALFMAGVVPGVVMT 180

Query: 183 GALWVTWAWLVRHEKIQPPPRKPAREVMKAARDAGWALLLP------------------- 223
             + +T A                + ++ A+ +    L +P                   
Sbjct: 181 VLMMLTVAIFAYKRGWGSDTPFEMKRLLAASLEVVVVLAVPLFIYLLMAAGLSMNLAVGI 240

Query: 224 -----------------------VIILVGLRMGVFTPTEAAVVAAVYAFFVATFIYRELS 260
                                  +I++ G+ MG FTPTEAAV A +++ F+    YR ++
Sbjct: 241 ALVVLLALDWYFDFSAVMALMTPIILIGGMTMGWFTPTEAAVAAVIWSLFLGLVRYRTMT 300

Query: 261 FDALYKVFVSAAKTSAVVMFLIAAAMVSAWLITVADLPSKVVGLLEPFMGNKILLMIMVM 320
              L +      +T+A V+F++ AA + AWL+TV+     + G +     NK + +I+V 
Sbjct: 301 MSTLARATFDTIETTASVLFIVTAASIFAWLLTVSQAAQMLSGAILTITDNKWVFLILVN 360

Query: 321 LLVMAVGTAMDMTPTILILTPVLMPVVIAAGIDPVYFGVMFIINNSIGLITPPVGVVLNV 380
           LL++ VG  +D    I IL P+L+P+    GIDPV+FG++  +N  IGL+ PP+G+VL V
Sbjct: 361 LLMLFVGCFLDTIAAITILVPILLPLTAQFGIDPVHFGLIMTLNLMIGLLHPPLGMVLFV 420

Query: 381 VAGVGKMKMDDVTRGVLPFMAAEFAIMFVMVIFPQLV 417
           ++ V K+ ++  T  +LP++   F  + ++   P +V
Sbjct: 421 LSRVAKLSVERTTMAILPWLVPLFIALILITFVPAVV 457