Pairwise Alignments

Query, 426 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

Subject, 425 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  246 bits (628), Expect = 1e-69
 Identities = 129/407 (31%), Positives = 230/407 (56%), Gaps = 2/407 (0%)

Query: 7   VGSLLVAMAMGIPIAFSLLACGVALMWHLDLFDAQILAQNVIGGADSFPLLAVPFFMLAG 66
           V + L    +G P+ +++L   +  +  ++     +LAQ +    DSFPL+AVP F+  G
Sbjct: 6   VAAFLGLFMLGFPVVYAILLPSILYVL-VEGLPFGLLAQRITYALDSFPLVAVPLFIFVG 64

Query: 67  EIMNVGGLSKRIVDLALALVGHVKGGLGYVTIMAGCLLSALSGSAVADAAALTALLLPMM 126
            +MN+ G++ RI   A  LVG + GGL  V +    + S +SG+A+AD   L  + +  M
Sbjct: 65  NLMNLSGITDRIFRFAYTLVGRMPGGLAQVNVFGSLIFSGMSGAALADIGGLGRIEIDAM 124

Query: 127 VKAGHDKARAGGLIAATGIIGPVIPPSIGLVIFGVAANVSISKLFMAAIVPGLLIGGALW 186
            K G D + AG + AA+  +GP+ PPSI L+++G   +VSI +L +A I+P +L    L 
Sbjct: 125 KKRGFDPSFAGAVTAASATLGPIFPPSIPLIVYGSVTSVSIVQLLVAGIMPAVLCTALLM 184

Query: 187 VTWAWL-VRHEKIQPPPRKPAREVMKAARDAGWALLLPVIILVGLRMGVFTPTEAAVVAA 245
           +T   + +RH   +      A E++     A  A+L P +++ G+  G FTPTEAA + A
Sbjct: 185 LTVLIVAIRHGHARAERWPTAGELVGTLVPALPAILAPALMVGGMTAGAFTPTEAAAITA 244

Query: 246 VYAFFVATFIYRELSFDALYKVFVSAAKTSAVVMFLIAAAMVSAWLITVADLPSKVVGLL 305
           VY  F++  +YREL+   L+   V  A++S+ ++ ++A+A +  W++ V  +P      L
Sbjct: 245 VYVIFISGVLYRELTPAHLWHSAVLTARSSSAILIIVASAALFGWILAVEQVPQTFAAAL 304

Query: 306 EPFMGNKILLMIMVMLLVMAVGTAMDMTPTILILTPVLMPVVIAAGIDPVYFGVMFIINN 365
             +  + ++L+I+  L+    G  +D T   L+L P++ P ++ AG+DPV  G++ I N 
Sbjct: 305 LGWSKDPLMLLIIANLIFFVAGMFLDSTTATLLLVPIIAPPLVMAGVDPVQLGIVTIFNL 364

Query: 366 SIGLITPPVGVVLNVVAGVGKMKMDDVTRGVLPFMAAEFAIMFVMVI 412
            +GL+TPP+G+ L +V+ + K+ +  + R ++PF     + + ++ +
Sbjct: 365 MLGLLTPPMGLSLFLVSDIAKVSIRQLLRALVPFYIPLVSTLVILTL 411