Pairwise Alignments

Query, 426 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

Subject, 429 a.a., TRAP transporter, DctM subunit from Dechlorosoma suillum PS

 Score =  267 bits (682), Expect = 5e-76
 Identities = 161/429 (37%), Positives = 245/429 (57%), Gaps = 6/429 (1%)

Query: 1   MTILVFVGSLLVAMAMGIPIAFSLLACGVALMWHLDLFDAQILAQNVIGGADSFPLLAVP 60
           M+ L+F+ S    M +G+P+  ++   G+A+++  DL     L  +V  G   +PLLA+P
Sbjct: 1   MSWLLFL-SFFALMLLGVPLGTAMGLAGLAVVFFGDL-GLMSLPTSVYTGIAKYPLLAIP 58

Query: 61  FFMLAGEIMNVGGLSKRIVDLALALVGHVKGGLGYVTIMAGCLLSALSGSAVADAAALTA 120
            F+LAG I    G++ R+V  A+ALVG  +GGL    I+   +L  +SGS  ADAAA+  
Sbjct: 59  VFVLAGMIFERSGVALRLVRFAVALVGQRRGGLALAAILVCMVLGGISGSGPADAAAVAT 118

Query: 121 LLLPMMVKAGHDKARAGGLIAATGIIGPVIPPSIGLVIFGVAA-NVSISKLFMAAIVPGL 179
           +++P M +AG+  A +  +IAA G    +IPPSI  +++ V     S+  LF A ++PGL
Sbjct: 119 VMIPSMARAGYPAAFSASVIAAAGSTAILIPPSIVFILYSVLVPQASVPALFAAGLIPGL 178

Query: 180 LIGGALWVTWAWL-VRHE-KIQPPPRKPAREVM-KAARDAGWALLLPVIILVGLRMGVFT 236
           L G AL +   WL VRH   +       AR+    A ++A W LL PVIIL G+R G FT
Sbjct: 179 LAGLALMLPAWWLSVRHGFGVAGLQDGEARQSFWSALKEASWGLLAPVIILGGMRSGAFT 238

Query: 237 PTEAAVVAAVYAFFVATFIYRELSFDALYKVFVSAAKTSAVVMFLIAAAMVSAWLITVAD 296
           PTEAAVVA  Y  FV   IYR L++  +Y+V V +A+ SAVVM +IA A V AW  +   
Sbjct: 239 PTEAAVVAVFYGLFVGLVIYRTLNWKNIYEVLVESAEVSAVVMLIIALASVFAWAGSTLG 298

Query: 297 LPSKVVGLLEPFMGNKILLMIMVMLLVMAVGTAMDMTPTILILTPVLMPVVIAAGIDPVY 356
               + G L    GN+  +++ V LL++  G  +D    + I  P L+PV++  G DPV+
Sbjct: 299 TFEALGGWLVGLSGNETAILLAVTLLLLIAGMFLDAVSILFIFMPFLLPVILHFGWDPVW 358

Query: 357 FGVMFIINNSIGLITPPVGVVLNVVAGVGKMKMDDVTRGVLPFMAAEFAIMFVMVIFPQL 416
           FGV+  +N +IG  TPP+ + L V + +  ++++D    VL  + A  + + ++   P+L
Sbjct: 359 FGVILTMNVAIGQFTPPMAINLMVTSRIAGIRIEDTVPWVLWMVGAMLSALLLVTFVPEL 418

Query: 417 VTVPARWFG 425
            T   R+ G
Sbjct: 419 ATGIPRYLG 427