Pairwise Alignments

Query, 324 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  277 bits (708), Expect = 3e-79
 Identities = 134/319 (42%), Positives = 215/319 (67%)

Query: 4   WLLRRVLQALGVVVVMTVIVFIGLHAIGNPIDILIGEDMNQQERLAAIARLGLDQPLWRQ 63
           +L++R+ QAL V+ V++++ F     +G+P+  L+G+ +++ ER A    LGL+ P   +
Sbjct: 4   FLVKRLYQALIVMFVISLVAFAIQDNLGDPLRELVGQSVSEAERQALRDELGLNDPFIIK 63

Query: 64  YLAFVDGALHGSLGRSFVYQEDAVRLILQRLPATMELAFAALLMAIVVGVPLGLFAGMKP 123
           Y  FV  A+ G LG S+ ++  A+ +I  +L AT+EL F A L+ IV  +PLG+++ + P
Sbjct: 64  YSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYSAIHP 123

Query: 124 EHPVSRTLMATSIVGFSLPAFWVALMLIMVFSVQLGWLPASGRGATRELFGVQWSWLTLD 183
           +   ++ +MA S +G S+P F  A+ML+ VFS++LGWLP+ GRG T  L G +  + TLD
Sbjct: 124 KSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESGFFTLD 183

Query: 184 GWQHLLLPAFNLALFKISLVLRLTRAGVREVLPQDYVKFARAKGLTPTRVVLMHVMRNTM 243
           G +HL+LP+  LA   + L +RL R+ + EVL  +Y+KFA+AKGL   ++   H ++NTM
Sbjct: 184 GLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHALKNTM 243

Query: 244 IPLVTVLGLELGATIAYAVVTESIFAWPGAGKLILDSINSLDRPVVVAYLMVVVVIFVTL 303
           +P++TV G+++G  +AY ++TE++F WPG G L L++IN +D P++ AY++ V +IFV  
Sbjct: 244 LPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLIFVVT 303

Query: 304 NLIVDLLYKLLDPRVRLEG 322
           N IVDLLY L++P V L G
Sbjct: 304 NTIVDLLYGLINPTVNLTG 322