Pairwise Alignments

Query, 324 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 306 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  204 bits (518), Expect = 3e-57
 Identities = 109/318 (34%), Positives = 182/318 (57%), Gaps = 17/318 (5%)

Query: 4   WLLRRVLQALGVVVVMTVIVFIGLHAIGNPIDILIGEDMNQQERLAAIARLGLDQPLWRQ 63
           ++LRR+ Q + VV  +T  VF+    +G+P+ +++     + +R A   ++GLDQP+  Q
Sbjct: 4   FILRRLFQGVLVVFGVTATVFVVTRLVGDPVALMLPLSATEAQRAAFAQQIGLDQPIATQ 63

Query: 64  YLAFVDGALHGSLGRSFVYQEDAVRLILQRLPATMELAFAALLMAIVVGVPLGLFAGMKP 123
           +L FV        G S   +  A+ ++ +RLP T+ L  A L  A+++ +PLG  + ++P
Sbjct: 64  FLRFVGDIATLDFGNSLWQRRPAIEVVFERLPNTLLLIAAGLGAAVMLSIPLGAVSALRP 123

Query: 124 EHPVSRTLMATSIVGFSLPAFWVALMLIMVFSVQLGWLPASGRGATRELFGVQWSWLTLD 183
              V R  M+  ++G ++P FW+ L+ IM+F+V L WLP SG G                
Sbjct: 124 GGLVDRLTMSVGLLGLAMPQFWLGLVAIMIFAVTLRWLPTSGMGTA-------------- 169

Query: 184 GWQHLLLPAFNLALFKISLVLRLTRAGVREVLPQDYVKFARAKGLTPTRVVLMHVMRNTM 243
              HL+LPA  LAL  ++    + RA + + L + YVK ARAKGL  TR++ +H +RN +
Sbjct: 170 --AHLVLPALTLALTPLARFTMMVRASMIDELNKPYVKTARAKGLGLTRILRVHTLRNIL 227

Query: 244 IPLVTVLGLELGATIA-YAVVTESIFAWPGAGKLILDSINSLDRPVVVAYLMVVVVIFVT 302
           +P +++ G EL AT++ Y VV E++FAWPG G   + +I   D  ++ A + V+  + V 
Sbjct: 228 VPFLSISGWELIATLSGYTVVVETVFAWPGLGLTAVQAIQRGDLFLMQAIVFVIAFLIVL 287

Query: 303 LNLIVDLLYKLLDPRVRL 320
           + + +D+L K +DPR+ L
Sbjct: 288 IGIALDILSKAVDPRMEL 305