Pairwise Alignments

Query, 324 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 325 a.a., oligopeptidemurein peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  306 bits (784), Expect = 4e-88
 Identities = 149/316 (47%), Positives = 217/316 (68%), Gaps = 1/316 (0%)

Query: 6   LRRVLQALGVVVVMTVIVFIGLHAIGNPIDILIG-EDMNQQERLAAIARLGLDQPLWRQY 64
           L R+ QA  +++ M++I FIG+H++GNP+  ++  E    ++  AA   LGLDQP+WRQY
Sbjct: 8   LGRLGQAFLLLIAMSLIGFIGIHSVGNPVFNVVNIETATPEDIHAATIALGLDQPIWRQY 67

Query: 65  LAFVDGALHGSLGRSFVYQEDAVRLILQRLPATMELAFAALLMAIVVGVPLGLFAGMKPE 124
           LAF+   + G+ G S++Y   A  L++ +LPAT+ELA  A+L+A  +G  LGL AG +  
Sbjct: 68  LAFIGNVVSGNFGTSYIYHLPAFELVMSKLPATLELASIAMLIAAPLGTGLGLLAGRRSG 127

Query: 125 HPVSRTLMATSIVGFSLPAFWVALMLIMVFSVQLGWLPASGRGATRELFGVQWSWLTLDG 184
               RT++  S+   S+P+FW+A+MLI+V ++  GW P+ GRG T    G +WS+LT +G
Sbjct: 128 TLFDRTMVKASVSALSIPSFWLAMMLILVGAILTGWFPSGGRGLTASFLGQEWSFLTANG 187

Query: 185 WQHLLLPAFNLALFKISLVLRLTRAGVREVLPQDYVKFARAKGLTPTRVVLMHVMRNTMI 244
             HL+LPA  LA+  I+L+ RL+R+G  EV   DY +F RAKGL+  R++  H + N  +
Sbjct: 188 LWHLVLPALALAIPNIALIARLSRSGTIEVENLDYTRFCRAKGLSARRILFRHTLPNISV 247

Query: 245 PLVTVLGLELGATIAYAVVTESIFAWPGAGKLILDSINSLDRPVVVAYLMVVVVIFVTLN 304
           P+VT++GL+ G  +A+AVV E+IF+WPG GKL++DSI  LDRPVV+A L V+ V FV LN
Sbjct: 248 PIVTIIGLQFGGMLAFAVVVETIFSWPGVGKLLIDSIQLLDRPVVMATLTVIAVAFVALN 307

Query: 305 LIVDLLYKLLDPRVRL 320
            +VDL Y +LDPRVRL
Sbjct: 308 ALVDLFYAVLDPRVRL 323