Pairwise Alignments

Query, 299 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 291 a.a., oligopeptidemurein peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  277 bits (708), Expect = 2e-79
 Identities = 139/275 (50%), Positives = 190/275 (69%), Gaps = 1/275 (0%)

Query: 22  HSRIAIGGLVVLGIVVLAALLAPWITPQNPYDLLQLDVLDARLPPGSHSSEGGYTYWLGT 81
           H  +     ++L   +L A+ AP I PQNPYD LQ+   +A  PPG+  S GGY Y LGT
Sbjct: 14  HGPVLTASKLLLASYILVAIAAPLIAPQNPYDPLQIYGWEASSPPGTRGS-GGYLYLLGT 72

Query: 82  DGQGRDLYSAIVYGLRISLTVGVGSALIAAVVGTLVGLIAAYAGGKVDALLMRLVDLLLS 141
           DG GRD+ S I+YGLRISL V + S+ +AA++G   G+ AAY G  VD  +MRLVDL LS
Sbjct: 73  DGLGRDIVSTILYGLRISLVVSIVSSALAALIGLTAGVSAAYFGKWVDIAIMRLVDLQLS 132

Query: 142 FPTILMALMILAYVGKGVGNVMLTLVLLEWAYYARTARGQALVEARREYVDAAQGQGIPR 201
            PTIL+AL+ +  +G G+  ++L L++ +WA YAR ARG AL EA + Y+DAA+   +P 
Sbjct: 133 LPTILIALIAIVTLGPGIDRIILALIIAQWATYARIARGVALSEANKPYMDAARLMRLPT 192

Query: 202 WRIVTGHILPNCLPPLLVIGALQIARAITLEATLSFLGLGVPITEPSLGLLISNGYQYLL 261
            RI+  H+LPN + P + +  +++  A+ LEATLSFLGLGVPI +PSLG  ++NG+QYLL
Sbjct: 193 SRIIFRHLLPNSIAPAVTLIPIEVGHAVALEATLSFLGLGVPIDKPSLGSAVANGFQYLL 252

Query: 262 SNEYWISFFPGVALLAAIVAINLVGDQLRDVLNPR 296
           + +YWIS FPG+AL   I +INLVG+ +R  L+PR
Sbjct: 253 TGQYWISLFPGLALFGLIASINLVGEDVRRSLDPR 287