Pairwise Alignments

Query, 688 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 334 a.a., oligopeptide transport ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  283 bits (724), Expect = 9e-81
 Identities = 157/332 (47%), Positives = 198/332 (59%), Gaps = 18/332 (5%)

Query: 355 QDVPLIELRQVAQRFGATLPPGAVGRALRSVGLSKPPVVTHAVDVVDLSVRPGEVVGLVG 414
           Q  P + + ++ + F  + P       L  V   KP     AV+ +  +V  G  + +VG
Sbjct: 6   QKTPALTVDRLVKTFDVSAP------WLNRVVERKPRQYLQAVNDISFTVPAGGCLSIVG 59

Query: 415 ESGCGKSTLGRIAAGLLTPTEGEV-IVGGKPVASLSAQEQLAARLRIQMVFQDPYASLNP 473
           ESGCGKST+ R+  GL  PT G +    GK  A LSAQ          M+FQDPYASLNP
Sbjct: 60  ESGCGKSTVARLVTGLHRPTSGGIRFAPGKSGAPLSAQ----------MIFQDPYASLNP 109

Query: 474 RLRVSRIVGEAAMLHGLTDAAGQ-DDYVCAQLERAGLDPALRHRYPHQFSGGQRQRIGIA 532
           R RV  I+ E      L   A +  + V   L   GL P+   ++PH+FSGGQRQRI IA
Sbjct: 110 RWRVKNIIAEPLRELKLRKTAAEVTERVEELLGIVGLSPSDGEKFPHEFSGGQRQRISIA 169

Query: 533 RALAVQPSMLVCDEAVAALDVSIQAQILNLFMDLRDQLGLAYLFISHDLGVIEHLCDRVV 592
           RALA +P  LVCDE  +ALDVS+QAQ+LNL   L+D+LGL YLFISHDL V+  + DR+ 
Sbjct: 170 RALASEPEFLVCDEPTSALDVSVQAQVLNLMRRLQDELGLTYLFISHDLSVVRQMSDRIA 229

Query: 593 VMYLGRVVESAPVADLFARPAHPYTQALLAEIPSIDARGTTFSAIRGEIPSPIAPPSGCH 652
           VMYLGR+VE     +LFA+P HPYT+ LL  IP+I+A         GE+PSP+ PPSGC 
Sbjct: 230 VMYLGRIVEEGDTEELFAQPRHPYTRLLLQTIPNIEAPNRNREPASGEVPSPLKPPSGCA 289

Query: 653 FHPRCPQAMPRCRTEVPRLRGIAIRHATACHL 684
           FHPRCP A  RC  EVP +R +      ACHL
Sbjct: 290 FHPRCPVATARCSKEVPEVRVLQNGTRVACHL 321



 Score =  208 bits (529), Expect = 4e-58
 Identities = 120/287 (41%), Positives = 167/287 (58%), Gaps = 19/287 (6%)

Query: 30  LPVVDGVSFTLGRGKVLGLVGESGSGKSVTGFSIMGLVDPPGKVEGGQVLFQGRELTQLP 89
           L  V+ +SFT+  G  L +VGESG GKS     + GL  P     GG     G+    L 
Sbjct: 39  LQAVNDISFTVPAGGCLSIVGESGCGKSTVARLVTGLHRP---TSGGIRFAPGKSGAPLS 95

Query: 90  AIERRELRGNRIAMIFQDPMATLNPVLRVDTQMIEAVKAHK-RVSTEEARRHARDTLGLM 148
           A            MIFQDP A+LNP  RV   + E ++  K R +  E      + LG++
Sbjct: 96  A-----------QMIFQDPYASLNPRWRVKNIIAEPLRELKLRKTAAEVTERVEELLGIV 144

Query: 149 GI-PSPEERLRAYPHQLSGGMRQRVAIAIAMLHGPDLIIADEPTTALDVTIQAQILSEVQ 207
           G+ PS  E+   +PH+ SGG RQR++IA A+   P+ ++ DEPT+ALDV++QAQ+L+ ++
Sbjct: 145 GLSPSDGEK---FPHEFSGGQRQRISIARALASEPEFLVCDEPTSALDVSVQAQVLNLMR 201

Query: 208 KLVRETGTSLIWISHDLSVVASLADEIAVMYAGRIVEHGTVADVLDHPQHPYTRGLIDSL 267
           +L  E G + ++ISHDLSVV  ++D IAVMY GRIVE G   ++   P+HPYTR L+ ++
Sbjct: 202 RLQDELGLTYLFISHDLSVVRQMSDRIAVMYLGRIVEEGDTEELFAQPRHPYTRLLLQTI 261

Query: 268 PSANERGARLRQIQGMTPSLLKMPAGCAFAPRCPHADAACEQQRPEV 314
           P+            G  PS LK P+GCAF PRCP A A C ++ PEV
Sbjct: 262 PNIEAPNRNREPASGEVPSPLKPPSGCAFHPRCPVATARCSKEVPEV 308