Pairwise Alignments

Query, 521 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 534 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  149 bits (376), Expect = 2e-40
 Identities = 116/445 (26%), Positives = 204/445 (45%), Gaps = 46/445 (10%)

Query: 65  LEPALASSWKALDDKTWEFKLRTDIKWQDGTPFSADDIV--FSFQRSRNVPGSVASYSGA 122
           LE ALA  W+ +D  T ++ LR  +K+ DG+P +ADDIV  F +  S + P  +AS+  +
Sbjct: 83  LETALADRWEEVDPTTIKYHLRGGVKFGDGSPLAADDIVATFKYHMSPDSPSQLASFYNS 142

Query: 123 LRTVESVTAKDPATLIVKTNTPNPMLPLEIASIYIVSKHVGEKSKTEDYNAGRAV---VG 179
           + TVE+ TA D  T  VK   PN       A +   +  V +K +  D N G      +G
Sbjct: 143 VATVEA-TAPDEVT--VKLKAPNVQFAFTPAHM---AGFVFKKEQLADKNIGTPEALPLG 196

Query: 180 TGPYKFVSYVPGDRTVFERNPGYYGPKPLWEKVNYRFINNGAARTAALLAGDVDVIDKVA 239
           TG YK V +VP DR + E    Y GPKP  +++ ++ I +  AR  A+  G++D    +A
Sbjct: 197 TGAYKLVEFVPTDRVILEARDDYSGPKPAVKRITFKAIPDRPARLLAMQQGEIDGTFDLA 256

Query: 240 VTDVEKLRKDPKVSVYTYPGLRVLLLQPTFKAGPNEFITDNAGKPLEKNPLLDVRVRQAL 299
           ++D+++ +    V V   P L V LL             D++  P +     D+ VR+A+
Sbjct: 257 ISDIDQWKALGNVDVVAAPSLGVYLL-----------TLDHSAPPFD-----DIHVRRAV 300

Query: 300 SLAINRKAIVDRVLQGTVTEANQWMPKGSFG-----------YNPDVKDIAYNAEQAKKL 348
           + +++R  +V  +L+G    A    P   +            Y   + + A++  +AK  
Sbjct: 301 AYSVDRNGLVQALLKGNGEAATALNPPEIWSGVLPPDEVRAFYATLLPNYAFDLNKAKAE 360

Query: 349 LAEAGFPQGFQIAIHVPGDRYPQAPETVQAVAQFWSRIGVKTKVEVV---PWAVYSGRAN 405
           LA++  P GF + I       P     +Q+V +   +IG++  ++      W  ++    
Sbjct: 361 LAQSNHPDGFDVTIPA-STADPYMVNILQSVTENLKQIGIRAHIQESDNNTW--FTNYVT 417

Query: 406 KNEYAVSVIAWGNGTGEAGYGLLQTLTTPDAKRGRGSNNWGRYSNESVDKALDAATVEFD 465
            ++  + ++A+     +A      +L    A   +G  N   ++N  VD  L  A    D
Sbjct: 418 HDKLGMQIMAYYPDFADAAN--YPSLFFSSANAEKGGMNGSNFNNREVDAKLKIANENAD 475

Query: 466 AKRREAIFRHAAKLVTDDVGQIPLY 490
            K R    +    +  ++V  +P++
Sbjct: 476 PKARADALKKVFTIANEEVAVVPIF 500