Pairwise Alignments

Query, 521 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  178 bits (451), Expect = 5e-49
 Identities = 162/525 (30%), Positives = 248/525 (47%), Gaps = 49/525 (9%)

Query: 7   IVAAALLATGVSAS---AQT----LSIGFADPVSSVDPELNNHAGDRSLALHFWDSIINS 59
           I  AAL   G +A+   AQT    L +G      S+DP       D  + ++ +D ++  
Sbjct: 9   IALAALAFAGAAAAPAAAQTPPDVLVVGQIAEPQSLDPHTVTATNDFRILVNVYDGLVRF 68

Query: 60  RDGG-KLEPALASSWKALDD-KTWEFKLRTDIKWQDGTPFSADDIVFSFQR--SRNVP-- 113
           +DG  ++EPALA SWK  DD KT+ F LR  +K+ DG+ F A+ + F+F R   ++ P  
Sbjct: 69  KDGTLEVEPALAESWKISDDGKTYTFTLRQGVKFHDGSNFDAEAVKFNFDRMLKKDHPFY 128

Query: 114 -GSVASYSGALRTVESVTAKDPATLIVKTNTP-NPMLP-LEIASIYIVSKHVGEKSKTED 170
                  S    +V++V   D  T+  K +    P L  L   +  IVS    EK   E 
Sbjct: 129 DTGPFPLSFNFASVKAVNVLDEHTVEFKLSEAFAPFLSNLAYPTGLIVSPVAVEKHGKE- 187

Query: 171 YNAGRAVVGTGPYKFVSYVPGDRTVFERNPGYYGPKPLWEKVNYRFINNGAARTAALLAG 230
              GR+  GTGP+KFV ++   R V ERNP Y+      + V +R I +   R A ++AG
Sbjct: 188 --YGRSPSGTGPFKFVEWLSNQRVVVERNPDYWDSAAKLQAVVFRPITDANTRVAEMMAG 245

Query: 231 DVDVIDKVAVTDVEKLRKDPKVSVYTYPGLRVLLLQPTFKAGPNEFITDNAGKPLEKNPL 290
            +DV+ +V   ++    +D   +V               +AGP+ + T    K   + P 
Sbjct: 246 GIDVMVEVPPDNLATFEQDANFAV-------------AEQAGPHVWFTILNTK---QGPF 289

Query: 291 LDVRVRQALSLAINRKAIVDRVLQGTVTEANQWMPKGSFGYNPDVKDIAYNAEQAKKLLA 350
            D RVRQA + A+N++ +VD VL+GT T A   +P         V+  A++ E+AK LLA
Sbjct: 290 ADKRVRQAANYAVNKQTLVDDVLRGTATVAAGPIPPAFNWVESSVEPYAHDPEKAKALLA 349

Query: 351 EAGFPQGFQIAIHV-PGDRYPQAPETVQAVAQF-WSRIGVKTKVEVVPWAVYSGRAN--- 405
           EAG  +  Q+  +V  G      P T+ A  Q     +G K K+E   W  + GR N   
Sbjct: 350 EAGV-ENPQVTFYVTEGGSGMLDPITMGAAIQADLQAVGFKVKIETYEWNTFLGRVNPGL 408

Query: 406 KNEYAVSVIAW-GNGTGEAGYGLLQTLTTPDAKRGRGSNNWGRYSNESVDKALDAATVEF 464
           + +  ++ +AW  N      Y  L+T   PD    +G  N G YSN  +D+ L+ A    
Sbjct: 409 EGKADMAEMAWMTNDPDTVPYLTLRTDAMPD----KGGFNSGYYSNPQLDELLEKARRST 464

Query: 465 DAKRREAIFRHAAKLVTDDVGQIPLYHYQN---IWAAKKGLKVVP 506
           D   R  ++     +V DD   + + +++      AA KG K+ P
Sbjct: 465 DQAERGKLYGEVQSIVHDDAPWLFVANWKQNAVTTAAVKGFKLQP 509