Pairwise Alignments

Query, 298 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  143 bits (360), Expect = 5e-39
 Identities = 88/288 (30%), Positives = 145/288 (50%), Gaps = 8/288 (2%)

Query: 4   LQQLKVFSEVIARKSFTRAAIALGVSKASVTKTVAQLEKDVGVRLLNRSTRSVTPTDAGQ 63
           L  L +F  V+   S+T  +    +  A++T+ +  LE  + +RLLNR  R +T T+AG+
Sbjct: 11  LDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGE 70

Query: 64  TLAQRLVPLFGLIQELDTELSDFAAHPRGRLRVAAPHGLSLSLLGWHIEDFITGHPDVHV 123
              +   PL   +  +  E++D      GR+R++AP  L+  ++      F+  +PD+H+
Sbjct: 71  RFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIHI 130

Query: 124 SIHLSNRDDDLVMGAIDVALRIGPIEARDAVVRKLQPVPLVLCASPTYWARKGMPSKPEE 183
            + +SN+ DDL     DV  R+GP      + RK+  V  +L ASP Y +    P+  EE
Sbjct: 131 ELMMSNQADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQYLSSHPQPTHAEE 190

Query: 184 LARHEVLT-YSL--WDASPRLPFLIDGKTQYMPVRSRLDADDAAPLIALAVKGLGVTCVP 240
           L +H++L  Y L  W  +        G+T     R R  A     + +   +GLG+T +P
Sbjct: 191 LHQHQLLKGYPLLKWQLTNS-----QGETVVNSDRGRFQASALNVVRSACSEGLGITLMP 245

Query: 241 EVLARAHLGSGALVPVLQDAMPPTIWLYATYAHRSHKSAALRAFLDFL 288
           +V+ R  L  G+LV VL D       +Y  Y H+ H+   +R F+DF+
Sbjct: 246 DVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFV 293