Pairwise Alignments

Query, 687 a.a., Tetrapartite efflux system, inner membrane component FusBC-like from Variovorax sp. SCN45

Subject, 438 a.a., HlyD family secretion protein from Pseudomonas fluorescens FW300-N2E2

 Score = 43.9 bits (102), Expect = 2e-08
 Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 7/166 (4%)

Query: 140 RVQEIGLGILCASLVHSIALPAGLAPPLLGLMDRALGDARRWMTDLLRDGLARTDGA--R 197
           R Q  GL  +  S VH     +G    L  L+ +   D +R +    + GL R++ A  R
Sbjct: 173 RQQIKGLESMVGSKVHLEKSYSGEIDELADLLKQGFVDKQRLLEQERKLGLLRSEVADHR 232

Query: 198 MAADRQRLALDITQLRLLSTHVPFDTGNLRWTTGAVRAMQDRISALTPTLSAIEDRLEAL 257
              DR RL ++ TQL++L     F+   ++     +  +Q RI  L    SA+EDRL  +
Sbjct: 233 STIDRTRLQINETQLQILQVDKDFNADVVK----QLAEVQTRIYDLKEKTSALEDRLSRI 288

Query: 258 KTAEGEVPRDIVSALERRSAWMAPQVPGSPDALPPTGEAMDEARAA 303
                E    I  ++      + P  P   D +P   + + EA+ A
Sbjct: 289 VIRAPEAGMVIDMSVHTIGGIVRPATP-LLDIVPSVSDLVIEAQVA 333