Pairwise Alignments

Query, 563 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 296 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 88.2 bits (217), Expect = 4e-22
 Identities = 81/266 (30%), Positives = 132/266 (49%), Gaps = 27/266 (10%)

Query: 31  PILRLIWDSFHTADGTLSFSSYAAALGRSRNLQALLNSFYLGVAVTAIAIALGVPLALAV 90
           P+ RLI  SF  + GT  FS Y        +L+ L ++  +   VT   + LG P+A  +
Sbjct: 46  PVARLIALSF--SGGT--FSHYRRIFTEPLHLEVLFSTIEVAFVVTVAGLLLGFPVAYLM 101

Query: 91  SRTNMPARGFTHVSVLAAFVMPNFLGAI----AWILLAGPNAGWLNRLWSEVLGTDRGPF 146
           +R +   RG   ++V A   +P +   +    AW++L   N G +N+L ++  G   GP 
Sbjct: 102 ARLS---RGLA-MAVAACVFVPLWTSVLIRSYAWVVLLQRN-GIVNKLLADT-GVTEGPL 155

Query: 147 NIFSFWG---LAFVIALYTYPLIYVFTKSALDLVSTELEDAASIHGAGKLRTLTRVTLPL 203
            +    G   LA    L  + ++ ++  SAL  +  +   AA   GAG +R    VTLPL
Sbjct: 156 KLIYTQGAVILAMTHVLMPFMILPIY--SALRALPPDYVRAARNLGAGPIRAFVTVTLPL 213

Query: 204 VLPSIVGAAILIFLESVALYGTPALIAIPAGLNLAT---TQIVSFFEYPLKVEQAAAFSM 260
            LP I   +++ F+ ++  Y TPAL+  P+ + +AT    Q     ++P     AAA S 
Sbjct: 214 SLPGIFAGSVMCFVLALGFYITPALVGGPSSMLMATLIGQQTTVLLDWPF----AAALST 269

Query: 261 PILALTVVMLYLQRRLLA-RKGFVSV 285
            +LA+T++ + + RR L+  KG  SV
Sbjct: 270 VLLAVTLLFVLMFRRTLSLSKGLNSV 295



 Score = 58.5 bits (140), Expect = 3e-13
 Identities = 63/264 (23%), Positives = 113/264 (42%), Gaps = 30/264 (11%)

Query: 307 YSALVSLLTVVMPLIILVLAS----LSKAWGRGFSAGNLTFANFYNIFFEQLTVRSALVN 362
           YS + S+  +V PL+  +LA     +++     FS G  TF+++  IF E L +   L +
Sbjct: 23  YSPIASM-ALVTPLLAAMLAGFLYPVARLIALSFSGG--TFSHYRRIFTEPLHLE-VLFS 78

Query: 363 TVTYSAVTALVCVAMGMCVAYATQRR------------ITPFPTLIQFLALAPVAV---P 407
           T+  + V  +  + +G  VAY   R               P  T +   + A V +    
Sbjct: 79  TIEVAFVVTVAGLLLGFPVAYLMARLSRGLAMAVAACVFVPLWTSVLIRSYAWVVLLQRN 138

Query: 408 GLILAIGLYAAYAGPPFSLYGTGALVVVAFTTRFLPIAVTACGAGVRSLNPELEEAVRIL 467
           G++  +         P  L  T   V++A T   +P  +    + +R+L P+   A R L
Sbjct: 139 GIVNKLLADTGVTEGPLKLIYTQGAVILAMTHVLMPFMILPIYSALRALPPDYVRAARNL 198

Query: 468 GGGRLTALGKVVVPLLNKTLVGAFILVFVICTKELSTAVFLTGPASRVVSVLTLDLSEQG 527
           G G + A   V +PL    +    ++ FV+      T   + GP+S +++ L   + +Q 
Sbjct: 199 GAGPIRAFVTVTLPLSLPGIFAGSVMCFVLALGFYITPALVGGPSSMLMATL---IGQQT 255

Query: 528 ----NYESLAAMGVVLVVIVTLVV 547
               ++   AA+  VL+ +  L V
Sbjct: 256 TVLLDWPFAAALSTVLLAVTLLFV 279