Pairwise Alignments

Query, 353 a.a., Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 356 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  246 bits (628), Expect = 7e-70
 Identities = 129/287 (44%), Positives = 186/287 (64%), Gaps = 9/287 (3%)

Query: 4   LELNNVRKQYGALAVVDDLSLQLRKGELVTLLGPSGCGKTTTLRMIAGFIELSGGSIAVD 63
           +   NV K YG L  VDDL L +  G+ VTLLGPSGCGK+TTLRM+ GF + S G I ++
Sbjct: 5   VHFKNVNKYYGGLPAVDDLDLAVESGQFVTLLGPSGCGKSTTLRMLGGFEQPSSGEIYLE 64

Query: 64  GRQISGAGRTVPPEHRGMSMIFQSYAIWPNMTVAENVAFGLNVRRVPGEESKRRVEEMLD 123
           G+ I+     +PP  R ++++FQ YA++P++ V  N+AFGL ++ +  +   +R  E+L 
Sbjct: 65  GKPITH----LPPNRRNVNIVFQDYALFPHLNVGRNIAFGLELKGLSSDAIHKRTMELLA 120

Query: 124 VVKLGALAQRYPAELSGGQQQRVALARAMVVRPEVLLLDEPLSNLDANLREEMAGEIRRL 183
           +VKL   A R P +LSGGQ+QRVAL RA+   P VLLLDEPLS LDA LR++M  E++ +
Sbjct: 121 LVKLQDFADRMPDQLSGGQRQRVALMRALAPDPNVLLLDEPLSALDAKLRQQMQIELKTI 180

Query: 184 HDEFNFTTVYVTHDQTEAMTISDRIAVLNLGKLEQIDTPWNLYNRPRTRFVAGFIGQTNL 243
                 T ++VTHDQ EA+T+SD I V+N G++EQ+  P  LY+RPR+RFVA FIGQ+N 
Sbjct: 181 QRTTGKTFIFVTHDQEEALTMSDVIVVMNKGRIEQMGGPNELYSRPRSRFVANFIGQSNF 240

Query: 244 VEGHV--RDGQIRLRGLEGVL---PMGGQAAAASADMRISIRPQSLF 285
           +EG +   DG        G +    + G    A +   +++RP++L+
Sbjct: 241 LEGKLLSHDGTTAAIDWNGSIIHADLNGTKLPAGSGATVALRPEALY 287